| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is inlJ [H]
Identifier: 226225371
GI number: 226225371
Start: 2875330
End: 2877870
Strand: Direct
Name: inlJ [H]
Synonym: Lm4b_02794
Alternate gene names: 226225371
Gene position: 2875330-2877870 (Clockwise)
Preceding gene: 226225365
Following gene: 226225379
Centisome position: 98.72
GC content: 37.43
Gene sequence:
>2541_bases TTGAAAACTTCTAAAATAATAATAGCTTCATTAGTTAGTTTAACCCTGGTTTCAAACCCAATTTTAACATTCGCAGCAAC GAATGATGTGATTGATAATACAACAGAAATCACTACTGATAAAGAAACAAGCCCAACTCAACCAACTATTAAAAACACAC TCAAAGCTGGTCAAACACAAAGTTTTAACGACTGGTTTCCTGATGACAATTTTGCTTCAGAGGTAGCAGCAGCATTTGAA ATGCAAGCAACTGACACTATCAGCGAAGAACAACTTGCTACTCTAACAAGCCTAGATTGCCACAATTCTTCCATAGCCGA TATGACTGGTATTGAAAAATTAACTGGTTTAACAAAATTAATTTGCACGTATAATAACATTACTACTCTTGATCTTAGCC AAAACACTAATTTAACTTATCTGGCATGTGATTCAAATAAACTTACAAACCTTGATGTAACCCCGCTTACAAAATTAACC TACTTAAATTGCGACACGAACAAACTCACAAAGATAGATGTAAGTCAAAATCCATTGTTAACTTATTTAAACTGCGCACG CAACACCTTAACCGAAATAGATGTCAGCCACAATACACAATTAACTGAGCTAGACTGCCATTTAAATAAAAAAATCACCA AATTAGATGTGACACCACAAACTCAATTAACAACCTTAGACTGTAGCTTTAATAAAATAACTGCATTAGATGTAAGTCAA AATAAATTACTGAACCGTCTAAACTGCGACACTAATAATATAACTAAACTGGACCTCAACCAAAATATTCAGCTAACTTT CCTAGATTGCTCCAGTAACAAATTAACCGAAATAGATGTAACCCCGCTTACACAGTTAACATATTTTGATTGTAGCGTAA ATCCTTTAACTGAATTAGATGTGTCTACGCTTTCAAAATTAACTACACTACACTGTATACAAACAGATTTATTAGAAATA GACCTAACACACAACACACAATTAATATATTTTCAAGCTGAAGGATGTAGAAAAATAAAAGAGCTTGATGTCACGCATAA TACACAATTATATTTATTAGACTGCCAAGCCGCTGGTATAACAGAATTGGATCTTTCACAAAACCCCAAATTAGTCTATT TGTATTTAAATAATACTGAACTAACGAAATTAGACGTTTCTCATAACACAAAGCTGAAAAGTTTGTCTTGCGTAAATGCT CACATCCAAGACTTCTCTTCTGTAGGTAAAATTCCTGTCCTTAACAATAACTTGGATGCTGAAGGGCAAACAATCACGAT GCCTAAAGAAACTTTAACAAACAACAGTTTAACCATTGCAGTTAGTCCTGATTTATTAGATCAGTTTGGAAATCCGATGA ATATTGAACCGGGAGACGGCGGTGTATACGATCGAGCAACAAATACAATAACTTGGGAAAATCTCAGCACAGACAATCCA GCCGTAACCTATACTTTCACTTCCGAAAACGGAGCTATAGTAGGAACCGTAACAACTCCATTTGAAGCCCCTCAACCCAT CAAAGGAGAAGACGTAACAGTTCATTATCTTGATGACAAAGGAGAAAAATTGGCGGCTGATGAAGTTTTAAGCGGTAATT TGGACGATCCTTATACTTCTAGCGCGAAAGACATCCCAGATTATACATTAACGACTACTCCAGATAACGCCACTGGAACA TTCACTACTACTAGCCAGTCCGTAACGTACGTGTACACTAAAAACATCGTAGCCGCAGAGCCTGTAACAGTGAATTACGT GGATGATACTGGAAAAACACTCGCTCCATCCGAAACATTAAACGGAAATGTAGGCGACACATATAACGCCACTGCCAAAC AAATCGACGGCTATACATTATCCGCCGAACCAACCAATGCAACTGGACAATTCACAAGTAGCGCGCAAACCGTCAACTAT ATTTACACAAAAAATCCAGCCCCTGAAAAAGGAGTTGTAGAAATTCACTATGTTGACGAAAATAATAAACAACTGAGCTC CGCCACTAAAATTTCTGGAACAGTAGGAGATAATTACACAACTGAGCCAAAAAATATCGACGGCTATACGCTAACAACTA CACCAGATAACGCAACCGGAACATTCAACACAAGTAGCCAAACAGTGACATATGTGTATACTAAAAATATCGTAGCAGCA GAGCCTGTAACAGTGAATTACGTGGATGCTAATGGCAAAACGCTCGCTCCATCCGAAACCCTAAACGGAACTATTGGCGA CACATATAAAGCAACCACCAAACAAATCGACGGCTACACATTATCCGCCGAACCAACCAATGCGACTGGACAATTCACAA ATAGCGCACAAACTGTCAACTACATTTACACGAAAAACACAAACATCGACCAACCTTTACCAGATAAAAAAACAACGAAA CCGTCTAATTTAAAGACAACCGAAGTGAAAAAAGCTTCAGATACCCTACCAAAAACAGGCGATTCCGCACCATGGAAATC AGCTCTACTTGGGGTATTCCTATCATCCACAGCTCTAGTTATCTGGAAAAAGAAAAAATAG
Upstream 100 bases:
>100_bases GTCACATATATCCGGAATTTTTGTACTTTTGCGAGACAAAATGATAAATAAAACGGCGTATAATAAATGATTGTAGAAAA CGAATAAGGAGTGCGCCAAA
Downstream 100 bases:
>100_bases TAAAAAAGCCGGTCAGGATTAATTTCCCGACCGGCTTTTTGATTTCAATCTTCTTCCACTTGGATAGAAACACCCACATC CAGTAATTCCTCAACTGCAT
Product: peptidoglycan bound protein (LPXTG motif)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 846; Mature: 846
Protein sequence:
>846_residues MKTSKIIIASLVSLTLVSNPILTFAATNDVIDNTTEITTDKETSPTQPTIKNTLKAGQTQSFNDWFPDDNFASEVAAAFE MQATDTISEEQLATLTSLDCHNSSIADMTGIEKLTGLTKLICTYNNITTLDLSQNTNLTYLACDSNKLTNLDVTPLTKLT YLNCDTNKLTKIDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITALDVSQ NKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEI DLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTKLDVSHNTKLKSLSCVNA HIQDFSSVGKIPVLNNNLDAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDRATNTITWENLSTDNP AVTYTFTSENGAIVGTVTTPFEAPQPIKGEDVTVHYLDDKGEKLAADEVLSGNLDDPYTSSAKDIPDYTLTTTPDNATGT FTTTSQSVTYVYTKNIVAAEPVTVNYVDDTGKTLAPSETLNGNVGDTYNATAKQIDGYTLSAEPTNATGQFTSSAQTVNY IYTKNPAPEKGVVEIHYVDENNKQLSSATKISGTVGDNYTTEPKNIDGYTLTTTPDNATGTFNTSSQTVTYVYTKNIVAA EPVTVNYVDANGKTLAPSETLNGTIGDTYKATTKQIDGYTLSAEPTNATGQFTNSAQTVNYIYTKNTNIDQPLPDKKTTK PSNLKTTEVKKASDTLPKTGDSAPWKSALLGVFLSSTALVIWKKKK
Sequences:
>Translated_846_residues MKTSKIIIASLVSLTLVSNPILTFAATNDVIDNTTEITTDKETSPTQPTIKNTLKAGQTQSFNDWFPDDNFASEVAAAFE MQATDTISEEQLATLTSLDCHNSSIADMTGIEKLTGLTKLICTYNNITTLDLSQNTNLTYLACDSNKLTNLDVTPLTKLT YLNCDTNKLTKIDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITALDVSQ NKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEI DLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTKLDVSHNTKLKSLSCVNA HIQDFSSVGKIPVLNNNLDAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDRATNTITWENLSTDNP AVTYTFTSENGAIVGTVTTPFEAPQPIKGEDVTVHYLDDKGEKLAADEVLSGNLDDPYTSSAKDIPDYTLTTTPDNATGT FTTTSQSVTYVYTKNIVAAEPVTVNYVDDTGKTLAPSETLNGNVGDTYNATAKQIDGYTLSAEPTNATGQFTSSAQTVNY IYTKNPAPEKGVVEIHYVDENNKQLSSATKISGTVGDNYTTEPKNIDGYTLTTTPDNATGTFNTSSQTVTYVYTKNIVAA EPVTVNYVDANGKTLAPSETLNGTIGDTYKATTKQIDGYTLSAEPTNATGQFTNSAQTVNYIYTKNTNIDQPLPDKKTTK PSNLKTTEVKKASDTLPKTGDSAPWKSALLGVFLSSTALVIWKKKK >Mature_846_residues MKTSKIIIASLVSLTLVSNPILTFAATNDVIDNTTEITTDKETSPTQPTIKNTLKAGQTQSFNDWFPDDNFASEVAAAFE MQATDTISEEQLATLTSLDCHNSSIADMTGIEKLTGLTKLICTYNNITTLDLSQNTNLTYLACDSNKLTNLDVTPLTKLT YLNCDTNKLTKIDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITALDVSQ NKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEI DLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTKLDVSHNTKLKSLSCVNA HIQDFSSVGKIPVLNNNLDAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDRATNTITWENLSTDNP AVTYTFTSENGAIVGTVTTPFEAPQPIKGEDVTVHYLDDKGEKLAADEVLSGNLDDPYTSSAKDIPDYTLTTTPDNATGT FTTTSQSVTYVYTKNIVAAEPVTVNYVDDTGKTLAPSETLNGNVGDTYNATAKQIDGYTLSAEPTNATGQFTSSAQTVNY IYTKNPAPEKGVVEIHYVDENNKQLSSATKISGTVGDNYTTEPKNIDGYTLTTTPDNATGTFNTSSQTVTYVYTKNIVAA EPVTVNYVDANGKTLAPSETLNGTIGDTYKATTKQIDGYTLSAEPTNATGQFTNSAQTVNYIYTKNTNIDQPLPDKKTTK PSNLKTTEVKKASDTLPKTGDSAPWKSALLGVFLSSTALVIWKKKK
Specific function: Involved in several steps of L.monocytogenes infection [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 MucBP domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014755 - InterPro: IPR009459 - InterPro: IPR019931 - InterPro: IPR001899 [H]
Pfam domain/function: PF06458 MucBP [H]
EC number: NA
Molecular weight: Translated: 92276; Mature: 92276
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSKIIIASLVSLTLVSNPILTFAATNDVIDNTTEITTDKETSPTQPTIKNTLKAGQTQ CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCC SFNDWFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIADMTGIEKLTGLTKL CCCCCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHEEE ICTYNNITTLDLSQNTNLTYLACDSNKLTNLDVTPLTKLTYLNCDTNKLTKIDVSQNPLL EEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCHH TYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITALDVSQ HHHHHHCCCCEEEECCCCCEEEEEEEECCCEEEEEECCCCCEEEEEECCCCEEEEEECCH NKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTELD HHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCC VSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGI HHHHHHHHHHHEEEEEEEEEEECCCCEEEEEECCCCCCHHHCCCCCCCEEEEEEECCCCC TELDLSQNPKLVYLYLNNTELTKLDVSHNTKLKSLSCVNAHIQDFSSVGKIPVLNNNLDA EEECCCCCCCEEEEEECCCEEEEEECCCCCCEEEEHHHHHHHHHHHHCCCCEEECCCCCC EGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDRATNTITWENLSTDNP CCCEEECCHHHHCCCCEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC AVTYTFTSENGAIVGTVTTPFEAPQPIKGEDVTVHYLDDKGEKLAADEVLSGNLDDPYTS EEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHCCCCCCCCCC SAKDIPDYTLTTTPDNATGTFTTTSQSVTYVYTKNIVAAEPVTVNYVDDTGKTLAPSETL CCCCCCCCEEEECCCCCCEEEEECCCEEEEEEECCEEEECCEEEEEECCCCCEECCCHHC NGNVGDTYNATAKQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNPAPEKGVVEIHYVDE CCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECC NNKQLSSATKISGTVGDNYTTEPKNIDGYTLTTTPDNATGTFNTSSQTVTYVYTKNIVAA CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEEECCEEEE EPVTVNYVDANGKTLAPSETLNGTIGDTYKATTKQIDGYTLSAEPTNATGQFTNSAQTVN CCEEEEEECCCCCEECCCHHCCCCCCCCEEHHHEECCCEEEECCCCCCCCCCCCCCEEEE YIYTKNTNIDQPLPDKKTTKPSNLKTTEVKKASDTLPKTGDSAPWKSALLGVFLSSTALV EEEEECCCCCCCCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCHHHHHHHHHHCCCEEE IWKKKK EEEECC >Mature Secondary Structure MKTSKIIIASLVSLTLVSNPILTFAATNDVIDNTTEITTDKETSPTQPTIKNTLKAGQTQ CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCC SFNDWFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIADMTGIEKLTGLTKL CCCCCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHEEE ICTYNNITTLDLSQNTNLTYLACDSNKLTNLDVTPLTKLTYLNCDTNKLTKIDVSQNPLL EEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCHH TYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITALDVSQ HHHHHHCCCCEEEECCCCCEEEEEEEECCCEEEEEECCCCCEEEEEECCCCEEEEEECCH NKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTELD HHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCC VSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGI HHHHHHHHHHHEEEEEEEEEEECCCCEEEEEECCCCCCHHHCCCCCCCEEEEEEECCCCC TELDLSQNPKLVYLYLNNTELTKLDVSHNTKLKSLSCVNAHIQDFSSVGKIPVLNNNLDA EEECCCCCCCEEEEEECCCEEEEEECCCCCCEEEEHHHHHHHHHHHHCCCCEEECCCCCC EGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDRATNTITWENLSTDNP CCCEEECCHHHHCCCCEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC AVTYTFTSENGAIVGTVTTPFEAPQPIKGEDVTVHYLDDKGEKLAADEVLSGNLDDPYTS EEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHCCCCCCCCCC SAKDIPDYTLTTTPDNATGTFTTTSQSVTYVYTKNIVAAEPVTVNYVDDTGKTLAPSETL CCCCCCCCEEEECCCCCCEEEEECCCEEEEEEECCEEEECCEEEEEECCCCCEECCCHHC NGNVGDTYNATAKQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNPAPEKGVVEIHYVDE CCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECC NNKQLSSATKISGTVGDNYTTEPKNIDGYTLTTTPDNATGTFNTSSQTVTYVYTKNIVAA CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEEECCEEEE EPVTVNYVDANGKTLAPSETLNGTIGDTYKATTKQIDGYTLSAEPTNATGQFTNSAQTVN CCEEEEEECCCCCEECCCHHCCCCCCCCEEHHHEECCCEEEECCCCCCCCCCCCCCEEEE YIYTKNTNIDQPLPDKKTTKPSNLKTTEVKKASDTLPKTGDSAPWKSALLGVFLSSTALV EEEEECCCCCCCCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCHHHHHHHHHHCCCEEE IWKKKK EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]