| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226225379
Identifier: 226225379
GI number: 226225379
Start: 2884452
End: 2885051
Strand: Direct
Name: 226225379
Synonym: Lm4b_02802
Alternate gene names: NA
Gene position: 2884452-2885051 (Clockwise)
Preceding gene: 226225371
Following gene: 226225391
Centisome position: 99.03
GC content: 39.33
Gene sequence:
>600_bases ATGACTAATACATTTTTAGATTCTATTAAAGTTCGTCGTTCCATTTATGCACTAGATAAAAACGTTTCCGTTGAGGATTC CAAAATTGAAGAAATTATTAAAGACGCTGTTAAATATAGCCCATCTTCATTCAACTCCCAAAGCTCTCGCGCTGTCATTC TTTTAGGAGAAAACCATGATAAACTTTGGAATATCGTAGAAGATACATTACGCGCTATCGTACCTGCTGAAAACTTTGCA GCTACAGAAGAAAAAGTTGGTTCTTTCCGCGCTGGATACGGAACAGTTCTTTTCTTTGAAGATACTGCTGTTATTGAAGG CTTACAAGAAAACTTCGCTCTATATGCAGACAACTTCCCTGTATGGTCTGAACAATCTTCAGGTATTGCACAACATTCAG TATGGGTTGCTCTTGCAAACGCTGGAATTGGTGCATCTCTACAACATTACAACCCACTAATTGACGATGCTGTTAAAGCT GAATGGAATATTCCTGCAAGCTGGAACTTACGCGCGCAAATGCCGTTTGGTAACATCGTTCAAGAAGCTGGCGAAAAAGA ATTCATCGATGACGCTGATCGTTTCCGCGTTTTCAAATAA
Upstream 100 bases:
>100_bases AGCGCTTACATATTCTTTTTCCGACAAAAACACTTGCAAATTAATGAATAGTTGCTATACTTATGTAAGTAAATAACATT AACAAAGGAGTTTTATTATT
Downstream 100 bases:
>100_bases TAAATGTTTCACGTGAAACAAAAAATTCCGCGACCATTAACTGGTATCGCGGAATTTTTATTTTGCCAAACTTTTAAATC TGCTTCTAAGTTCATCACAA
Product: nitroreductase family protein
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; Oxidoreductase Related Nitroreductase; Oxidoreductase Related Nitroreductase-Like Protein; Oxydoreductase Related Nitroreductase; Ypothetical Protein SMU.; Oxidoreductase/Nitroreductase
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTNTFLDSIKVRRSIYALDKNVSVEDSKIEEIIKDAVKYSPSSFNSQSSRAVILLGENHDKLWNIVEDTLRAIVPAENFA ATEEKVGSFRAGYGTVLFFEDTAVIEGLQENFALYADNFPVWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKA EWNIPASWNLRAQMPFGNIVQEAGEKEFIDDADRFRVFK
Sequences:
>Translated_199_residues MTNTFLDSIKVRRSIYALDKNVSVEDSKIEEIIKDAVKYSPSSFNSQSSRAVILLGENHDKLWNIVEDTLRAIVPAENFA ATEEKVGSFRAGYGTVLFFEDTAVIEGLQENFALYADNFPVWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKA EWNIPASWNLRAQMPFGNIVQEAGEKEFIDDADRFRVFK >Mature_198_residues TNTFLDSIKVRRSIYALDKNVSVEDSKIEEIIKDAVKYSPSSFNSQSSRAVILLGENHDKLWNIVEDTLRAIVPAENFAA TEEKVGSFRAGYGTVLFFEDTAVIEGLQENFALYADNFPVWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKAE WNIPASWNLRAQMPFGNIVQEAGEKEFIDDADRFRVFK
Specific function: Unknown
COG id: COG3560
COG function: function code R; Predicted oxidoreductase related to nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6319823, Length=198, Percent_Identity=32.3232323232323, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22237; Mature: 22106
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTFLDSIKVRRSIYALDKNVSVEDSKIEEIIKDAVKYSPSSFNSQSSRAVILLGENHD CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH KLWNIVEDTLRAIVPAENFAATEEKVGSFRAGYGTVLFFEDTAVIEGLQENFALYADNFP HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHCCEEEECCCC VWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKAEWNIPASWNLRAQMPFGNIV CCCCCCCCCHHHHEEEEEECCCCCCCHHHCCCHHHHHHHCCCCCCCCCCEEEECCCHHHH QEAGEKEFIDDADRFRVFK HHCCCCCCCCCCCCEEECC >Mature Secondary Structure TNTFLDSIKVRRSIYALDKNVSVEDSKIEEIIKDAVKYSPSSFNSQSSRAVILLGENHD CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH KLWNIVEDTLRAIVPAENFAATEEKVGSFRAGYGTVLFFEDTAVIEGLQENFALYADNFP HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHCCEEEECCCC VWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKAEWNIPASWNLRAQMPFGNIV CCCCCCCCCHHHHEEEEEECCCCCCCHHHCCCHHHHHHHCCCCCCCCCCEEEECCCHHHH QEAGEKEFIDDADRFRVFK HHCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA