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The map label for this gene is licB [H]

Identifier: 226225335

GI number: 226225335

Start: 2839977

End: 2840276

Strand: Reverse

Name: licB [H]

Synonym: Lm4b_02758

Alternate gene names: 226225335

Gene position: 2840276-2839977 (Counterclockwise)

Preceding gene: 226225336

Following gene: 226225334

Centisome position: 97.51

GC content: 34.33

Gene sequence:

>300_bases
ATGAAAAATATTATGTTGATGTGTAATGCGGGAATGTCTACAAGCGTTTTAGTGAGGAAAATGGAACGCGTTGTAGAAGA
ACGTAATTTAGAACTGACTATCTGGGCTATTTCAGAAACGGATTTCGAAAAAAATTGGCGTAAAGCTGATGCGATTTTAC
TTGGACCGCAAGTGAATTATATGAAAGATAAGGTTATAGAAACAGTTGGTGATAATGTATCGGTGGCAGTTATTGATATC
GTTGATTATGGTCGAATGAATGGTGAAAAAGTATTAGATTTAGCAATTAGTTTATTGTGA

Upstream 100 bases:

>100_bases
CTGCAGTATTCCAAATTTTCTTGATTGGCGTCTGCGTACTTCTTTACCTACCATTCTTAAAAGCCAATGACAGAATTAAA
GCCTAATTGGAGGGATTTTT

Downstream 100 bases:

>100_bases
CATTCTTAGTTTTTTAGCAAGGAGGAGAAAGAATATGGCTGTTTATTTGGATAAGGAGAAACCAGTTTCAGAACGTGTAG
AAGACTTACTTTCCAAGATG

Product: PTS, cellobiose-specific IIB component

Products: NA

Alternate protein names: EIIB-Lic; PTS system lichenan-specific EIIB component [H]

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MKNIMLMCNAGMSTSVLVRKMERVVEERNLELTIWAISETDFEKNWRKADAILLGPQVNYMKDKVIETVGDNVSVAVIDI
VDYGRMNGEKVLDLAISLL

Sequences:

>Translated_99_residues
MKNIMLMCNAGMSTSVLVRKMERVVEERNLELTIWAISETDFEKNWRKADAILLGPQVNYMKDKVIETVGDNVSVAVIDI
VDYGRMNGEKVLDLAISLL
>Mature_99_residues
MKNIMLMCNAGMSTSVLVRKMERVVEERNLELTIWAISETDFEKNWRKADAILLGPQVNYMKDKVIETVGDNVSVAVIDI
VDYGRMNGEKVLDLAISLL

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788034, Length=91, Percent_Identity=42.8571428571429, Blast_Score=69, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 11204; Mature: 11204

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIMLMCNAGMSTSVLVRKMERVVEERNLELTIWAISETDFEKNWRKADAILLGPQVNY
CCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCH
MKDKVIETVGDNVSVAVIDIVDYGRMNGEKVLDLAISLL
HHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKNIMLMCNAGMSTSVLVRKMERVVEERNLELTIWAISETDFEKNWRKADAILLGPQVNY
CCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCH
MKDKVIETVGDNVSVAVIDIVDYGRMNGEKVLDLAISLL
HHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]