Definition | Listeria monocytogenes Clip81459, complete genome. |
---|---|
Accession | NC_012488 |
Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is 226225265
Identifier: 226225265
GI number: 226225265
Start: 2757407
End: 2758354
Strand: Reverse
Name: 226225265
Synonym: Lm4b_02688
Alternate gene names: NA
Gene position: 2758354-2757407 (Counterclockwise)
Preceding gene: 226225266
Following gene: 226225264
Centisome position: 94.7
GC content: 36.71
Gene sequence:
>948_bases ATGAAAAAATTCCACGGGCTAGTGCTTACTGCGTTAGTAACTTGTCTAATCATTCCATTCTCATTGGCAGCAAGCGCTGA AACAAATGAAAATGGTAACAATTCAACACCTACAGAAGAAAAAACAACAGATACTACTGAAAACATAATTACTGAAGAAA AGCCAGAACCAGCAGTACCGACAAAAGACACGACTGTAACAACATCGCAAAAAAGCAAAGTTCAAACAACGATAGATATT ACCGATTCTCAAGAAGTTTACTCGTATGAACAAAATAGTAAGATTGATCTCAAAGATTTCACCGCAACATTAACTGATTA CACCGATACAAAACTAACCAATTATCGCTTAGCAGCCAATTCTAAACTAAGTACTGCACAAACAGGTATCCAAGAAGTCA CGCTCCTTGGAGATAATGAAGACGGCAAAACAACAGCAGTCAAACTCAATTACTTAGTCAAAGAAAAAACGGCCCAACTG ACTATTACAGATATGAATTTTGATTTAGAAACAAAAATTTTCACAGGTAAAACAAAACCATTCGCTAGTGTATATATGAG TTCTCCGGCAGATGAAAACTTTGGAGAAGGAACAACAACTGCGGATAAAGATGGTTATTTTTATGCAGAATGGGCGACAA CACCAAAACAAATTACGGCATATGCTTTTGATGAATCAGGTAATTATAGTGAAGAAGTAACCTATCAAGTCCCAGCGAAA AAACAAAATGAAGCAGTCGTAACAGCTCCAGATAAAGTGAAGAAAATCGAAACAAAGAACGCGGTCAAAAGCGCAACAGC AAAACCTGCTGATGTTACAAAAGTTACAAAAGATGACAAAACAGATTTGCCAAGCACAGGTGACAAAGGTACAGAATGGA TTTTCGTGGTAGCGGGTGTTATAGTTATTCTTGTGGCAGTGTTATTACTTAGGAAACGTAAAAAATAA
Upstream 100 bases:
>100_bases ATCGCAGTTTTAATATTTGTAACAATATTGTAATTTAAAATTGACTTTCATCACATTTCTGCTTATTATTAAACTAAGCA AAATGAAAGGGGAATTTATT
Downstream 100 bases:
>100_bases ACTAATTGCTATAGGGAATAACTCAAAAATAAGGAGCGAATAATGAAGAAGTTATTAAGCGGTTTAATTATTGTTTTAAT GGTTAGCCTACTTGGTCACT
Product: Peptidoglycan anchored protein (LPXTG motif)
Products: NA
Alternate protein names: Pepdidoglycan Bound Protein; Peptidoglycan Anchored Protein
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKKFHGLVLTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKPEPAVPTKDTTVTTSQKSKVQTTIDI TDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQL TITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAK KQNEAVVTAPDKVKKIETKNAVKSATAKPADVTKVTKDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK
Sequences:
>Translated_315_residues MKKFHGLVLTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKPEPAVPTKDTTVTTSQKSKVQTTIDI TDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQL TITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAK KQNEAVVTAPDKVKKIETKNAVKSATAKPADVTKVTKDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK >Mature_315_residues MKKFHGLVLTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKPEPAVPTKDTTVTTSQKSKVQTTIDI TDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQL TITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAK KQNEAVVTAPDKVKKIETKNAVKSATAKPADVTKVTKDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34555; Mature: 34555
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFHGLVLTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKPEPAVP CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC TKDTTVTTSQKSKVQTTIDITDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAAN CCCCEEECCCCCCEEEEEEECCCHHHHHHCCCCEEEHHHHHEECCCCCCCEEEEEEEECC SKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQLTITDMNFDLETKIFTGKTKP CCCCHHHCCCEEEEEECCCCCCCEEEEEEEEEEECCCEEEEEEECCCCEEEEEEECCCCC FASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAK HHHEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCC KQNEAVVTAPDKVKKIETKNAVKSATAKPADVTKVTKDDKTDLPSTGDKGTEWIFVVAGV CCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHH IVILVAVLLLRKRKK HHHHHHHHHHHHCCC >Mature Secondary Structure MKKFHGLVLTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKPEPAVP CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC TKDTTVTTSQKSKVQTTIDITDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAAN CCCCEEECCCCCCEEEEEEECCCHHHHHHCCCCEEEHHHHHEECCCCCCCEEEEEEEECC SKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQLTITDMNFDLETKIFTGKTKP CCCCHHHCCCEEEEEECCCCCCCEEEEEEEEEEECCCEEEEEEECCCCEEEEEEECCCCC FASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAK HHHEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCC KQNEAVVTAPDKVKKIETKNAVKSATAKPADVTKVTKDDKTDLPSTGDKGTEWIFVVAGV CCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHH IVILVAVLLLRKRKK HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA