Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226225264
Identifier: 226225264
GI number: 226225264
Start: 2756426
End: 2757364
Strand: Reverse
Name: 226225264
Synonym: Lm4b_02687
Alternate gene names: NA
Gene position: 2757364-2756426 (Counterclockwise)
Preceding gene: 226225265
Following gene: 226225263
Centisome position: 94.67
GC content: 37.49
Gene sequence:
>939_bases ATGAAGAAGTTATTAAGCGGTTTAATTATTGTTTTAATGGTTAGCCTACTTGGTCACTCCTTTAATGCCGAAGCAGCATC CTACGAAAAAATCATTTATGACAAAGCAGTTAATCTAAAAGGGGTAGTAAATCAGTCAAAACGAAATGATGGTATTAATA GCAAGATGTACAAAACGAGTAGTAGTGTTAAGTACCTCGGTTCAGCTAAGAAATACGACAAGAAGACGTTGATTATTACG CGCGAAGGAAAAACAGCAAGAGCTAAATGGTATTATTGTAAGCTAGGAAATACTACAATCGGATGGATTGACTCGCGTGC CTTTACGAATGTCGGCAAACCAACAATTGCTGACACCGTTCCAGCTCTTTGGAACAGTAAAAAGGCAATCATCACCACAA AACCAAAGAATACTACCGCAACAACCTACTTTTTCCAAAAAAATAGTGCAGGAAATTGGTATGAAGTTCGTCATTTTACC AGTCATATTGGCAAATGGGGATTTGATCCAAAGTTCTCTGAAAAAAGTTCTGGAACTCCAGTTGGCGTTTATCGTACAGG CATTGCATTTGGGCAAAAGGGTAATCCTGGTACGAAGCTGACATTCAGAGCGATTACTAATAGAAGTTATTGGATTTCTA ACTCTAACGACAAATCCTATAACACTTGGCAAGAACGCAATTCCTCTAGTTCTGCAGATGAAAAAATGAAGATTCCGCAG TACAAATACGGAATGGAAGTGAAATACAACGCTAAACGTGTAAAAGGTAAAGGATCGGCTGTGTTTTACCATGTTGATTC ACCGAAATACAATTACACATTAGGTTGCGTCGCTCAAAGTGAAGCCAATACAAAAGAAGTGCTAAAATTCGCGGATAAAA ATACACTTATTGTGTTAGGTGAAGAAAGCCGAATAAAAACTTTTTACGGTATAAATTAA
Upstream 100 bases:
>100_bases AGCGGGTGTTATAGTTATTCTTGTGGCAGTGTTATTACTTAGGAAACGTAAAAAATAAACTAATTGCTATAGGGAATAAC TCAAAAATAAGGAGCGAATA
Downstream 100 bases:
>100_bases GCTAGAGAATTTCTCTAGCTTTTTTGTTTGGCAAAAAAGCTAAGTAGCCTAGCCCCAAATTTTCTTCTATTTGACGTATA ATAAAAAGAAACGAAAACGC
Product: Secreted protein with 1 GW repeat
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG Family Protein; S-Layer Homology And Secreted GW Repeat Fusion Protein; LOW QUALITY PROTEIN LamB/YcsF Family Protein; S-Layer Domain Protein; S-Layer Domain-Containing Protein; SH3 Domain-Containing Protein; Secreted GW Repeat; Lipoprotein
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKKLLSGLIIVLMVSLLGHSFNAEAASYEKIIYDKAVNLKGVVNQSKRNDGINSKMYKTSSSVKYLGSAKKYDKKTLIIT REGKTARAKWYYCKLGNTTIGWIDSRAFTNVGKPTIADTVPALWNSKKAIITTKPKNTTATTYFFQKNSAGNWYEVRHFT SHIGKWGFDPKFSEKSSGTPVGVYRTGIAFGQKGNPGTKLTFRAITNRSYWISNSNDKSYNTWQERNSSSSADEKMKIPQ YKYGMEVKYNAKRVKGKGSAVFYHVDSPKYNYTLGCVAQSEANTKEVLKFADKNTLIVLGEESRIKTFYGIN
Sequences:
>Translated_312_residues MKKLLSGLIIVLMVSLLGHSFNAEAASYEKIIYDKAVNLKGVVNQSKRNDGINSKMYKTSSSVKYLGSAKKYDKKTLIIT REGKTARAKWYYCKLGNTTIGWIDSRAFTNVGKPTIADTVPALWNSKKAIITTKPKNTTATTYFFQKNSAGNWYEVRHFT SHIGKWGFDPKFSEKSSGTPVGVYRTGIAFGQKGNPGTKLTFRAITNRSYWISNSNDKSYNTWQERNSSSSADEKMKIPQ YKYGMEVKYNAKRVKGKGSAVFYHVDSPKYNYTLGCVAQSEANTKEVLKFADKNTLIVLGEESRIKTFYGIN >Mature_312_residues MKKLLSGLIIVLMVSLLGHSFNAEAASYEKIIYDKAVNLKGVVNQSKRNDGINSKMYKTSSSVKYLGSAKKYDKKTLIIT REGKTARAKWYYCKLGNTTIGWIDSRAFTNVGKPTIADTVPALWNSKKAIITTKPKNTTATTYFFQKNSAGNWYEVRHFT SHIGKWGFDPKFSEKSSGTPVGVYRTGIAFGQKGNPGTKLTFRAITNRSYWISNSNDKSYNTWQERNSSSSADEKMKIPQ YKYGMEVKYNAKRVKGKGSAVFYHVDSPKYNYTLGCVAQSEANTKEVLKFADKNTLIVLGEESRIKTFYGIN
Specific function: Unknown
COG id: COG3786
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35074; Mature: 35074
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLSGLIIVLMVSLLGHSFNAEAASYEKIIYDKAVNLKGVVNQSKRNDGINSKMYKTS CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEECC SSVKYLGSAKKYDKKTLIITREGKTARAKWYYCKLGNTTIGWIDSRAFTNVGKPTIADTV CCHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCEEEEECCCHHCCCCCCHHHHHH PALWNSKKAIITTKPKNTTATTYFFQKNSAGNWYEVRHFTSHIGKWGFDPKFSEKSSGTP HHHHCCCEEEEEECCCCCEEEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCE VGVYRTGIAFGQKGNPGTKLTFRAITNRSYWISNSNDKSYNTWQERNSSSSADEKMKIPQ EEEEEECEEECCCCCCCCEEEEEEECCCEEEEECCCCCCCCHHHHCCCCCCCCHHCCCCC YKYGMEVKYNAKRVKGKGSAVFYHVDSPKYNYTLGCVAQSEANTKEVLKFADKNTLIVLG CCCCEEEEECCEEECCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHCCCCEEEEEE EESRIKTFYGIN CCCCEEEEECCC >Mature Secondary Structure MKKLLSGLIIVLMVSLLGHSFNAEAASYEKIIYDKAVNLKGVVNQSKRNDGINSKMYKTS CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEECC SSVKYLGSAKKYDKKTLIITREGKTARAKWYYCKLGNTTIGWIDSRAFTNVGKPTIADTV CCHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCEEEEECCCHHCCCCCCHHHHHH PALWNSKKAIITTKPKNTTATTYFFQKNSAGNWYEVRHFTSHIGKWGFDPKFSEKSSGTP HHHHCCCEEEEEECCCCCEEEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCE VGVYRTGIAFGQKGNPGTKLTFRAITNRSYWISNSNDKSYNTWQERNSSSSADEKMKIPQ EEEEEECEEECCCCCCCCEEEEEEECCCEEEEECCCCCCCCHHHHCCCCCCCCHHCCCCC YKYGMEVKYNAKRVKGKGSAVFYHVDSPKYNYTLGCVAQSEANTKEVLKFADKNTLIVLG CCCCEEEEECCEEECCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHCCCCEEEEEE EESRIKTFYGIN CCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA