| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is kdpB
Identifier: 226225232
GI number: 226225232
Start: 2724793
End: 2726838
Strand: Reverse
Name: kdpB
Synonym: Lm4b_02654
Alternate gene names: 226225232
Gene position: 2726838-2724793 (Counterclockwise)
Preceding gene: 226225233
Following gene: 226225231
Centisome position: 93.62
GC content: 43.89
Gene sequence:
>2046_bases ATGATGGAAAAAGGTATTTGGAAAGATGCGCTGATTCAGTCGACGAAAAAACTGTCTCCAAAACTGCAAGTGAAAAATCC GGTGATGTTGCTTGTTTATGTTGGTGCGATTTTGGCAACGAGCCTTTATTTTCTCGGTTTCTTCGGGATTTCGGATGAGA AGTCTGGTTATACGCTAGCAATTGCGCTGATTTTATGGTTTACAGTGTTATTTGCGAATTTTGCAGAGGCGATTGCGGAA GGTCGCGGTCGAGCACAGGCGGATAGTTTGAAAATGGCTCGAAAAGACGTTTTAGCTCGAAAATTGAAGAATATTGATGA TAAAACTGATGTGATCGAAATTGCTTCGAATGACTTGAAAAAAGGCGACATTGTGTATGTCCTTGCAAATGAACAAATCC CGATGGATGGCGAGGTTATTGAAGGTGCGGCTTCAGTTGATGAAAGTGCAATAACTGGGGAGTCTGCCCCCGTAATTCGA GAGTCTGGCGGGGATAGAAGTGCCGTGACGGGTGGAACTACGCTTGTTTCTGACTGGCTTGTTGTTCGTGTGACGGCGGT CTCTGGAGAAAGTTTCTTAGATAAAATGATTGCAATGGTGGAAGGAGCTTCACGGAAAAAGACGCCGAATGAGATTGCGC TACAAATTTTGCTTGTAACGCTTTCGATTATTTTTTTGGCAGTTTCAGCGACGCTTTTACCATTTACTGAATTTGCGAGT AAGCAGGCGGGTGCTGGATCGGCAATTTCGATTACGAATGTGATTGCTTTGCTTGTTTGTTTGGCGCCAACTACGATTGG TGCACTACTTTCGTCGATTGGAATTGCAGGGATGAGTCGGTTAAATCAAGCGAATGTTTTAGCGATGAGTGGTCGTGCGA TTGAGGCAGCTGGTGATGTGGATGTGCTTTTGCTCGATAAAACTGGGACGATTACACTGGGAAACCGCAAAGCAAGCGAA TTTTTGCCAGTGGATGGTGTGACGGAACAAGAGCTGGCAGATGCGGCGCAACTTTCCTCGATTGCGGACGAAACAGCGGA AGGCAGGAGTATTGTTGTATTAGCGAAAGAACGGTTCGACATTCGCGGCCGAGATTTTGCTGAAATGCACGCAGAATTTG TTCCCTTCACTGCAACAACCCGAATGAGCGGAATTGACTATCAAGAAAATACGATTCGAAAAGGTGCGGCGGATGCGGTT CGTGCTTACGTAACGGCGAATGGCGGGACGTACCCAAAAGAGTGTGATGCAATTGTGAGCAAAGTTGCTGGTGCTGGTGG TACACCGCTTGTAGTAGTCCGAAATAACAAAGTGCTAGGCGTTATTTATTTAAAAGACATCGTGAAAAATGGAGTGAAAG AACGTTTCCTTGATTTACGAAAAATGGGTATTAAAACCATTATGATTACCGGTGATAACCCAATGACTGCGGCAGCCATT GCGGCGGAAGCAGGGGTCGATGATTTTCTAGCAGAAGCAACTCCAGAAGCAAAATTGGAATTAATTCGTGAATATCAACG GGAAGGTCATTTGGTTGCAATGACAGGTGATGGCACGAATGACGCACCAGCTCTTGCACAAGCGGATGTTGCTGTTGCGA TGAATACAGGAACACAAGCGGCAAAAGAAGCTGGGAATATGGTTGATCTGGATTCTAGTCCTACTAAATTAATTGATATT GTGCGGATTGGCAAACAACTTTTAATGACGCGTGGTGCACTGACAACATTTAGTGTTGCTAATGATTTAGCGAAATACTT TGCGATTATTCCAGTGCTGTTTTACGGTATTTTCCCACAACTTGAAGCACTTAATTTAATGGGATTAACCAGCCCGACGA GCGCTATTTTATCCGCGATTATTTACAATGCGGTGATTATCATTATTTTAATTCCGCTTTCTTTAAAAGGCGTGAAGTAT CGTGAAATGCCGGCCGGGAAATTACTGAGCAGAAATATGTTGATTTATGGTCTGGGCGGTTTGATTGCTCCATTTATCGC GATTAAATTGATTGATATGCTGTTAACTGTTTTAGGAATCGTTTAA
Upstream 100 bases:
>100_bases TTGGTGTTGTGGTACTTGTTGGCGCACTTAGTTTCTTGCCAGCACTTGCGCTTGGACCGATTGCGGACTTCTTTACAACT TTCAAATGAGGTGAATGGAA
Downstream 100 bases:
>100_bases GAGGGGGAGAAAACATGAAAAGATTTATGCAAATTTGGAAGCCGGCAGTAGTTGGATTTCTACTTTTGACATTGATGTGT GGTGTGGTTTATCCGGGTAT
Product: potassium-transporting ATPase subunit B
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] B chain 1; Potassium-binding and translocating subunit B 1; Potassium-translocating ATPase B chain 1 [H]
Number of amino acids: Translated: 681; Mature: 681
Protein sequence:
>681_residues MMEKGIWKDALIQSTKKLSPKLQVKNPVMLLVYVGAILATSLYFLGFFGISDEKSGYTLAIALILWFTVLFANFAEAIAE GRGRAQADSLKMARKDVLARKLKNIDDKTDVIEIASNDLKKGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIR ESGGDRSAVTGGTTLVSDWLVVRVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILLVTLSIIFLAVSATLLPFTEFAS KQAGAGSAISITNVIALLVCLAPTTIGALLSSIGIAGMSRLNQANVLAMSGRAIEAAGDVDVLLLDKTGTITLGNRKASE FLPVDGVTEQELADAAQLSSIADETAEGRSIVVLAKERFDIRGRDFAEMHAEFVPFTATTRMSGIDYQENTIRKGAADAV RAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNKVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAI AAEAGVDDFLAEATPEAKLELIREYQREGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTKLIDI VRIGKQLLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPQLEALNLMGLTSPTSAILSAIIYNAVIIIILIPLSLKGVKY REMPAGKLLSRNMLIYGLGGLIAPFIAIKLIDMLLTVLGIV
Sequences:
>Translated_681_residues MMEKGIWKDALIQSTKKLSPKLQVKNPVMLLVYVGAILATSLYFLGFFGISDEKSGYTLAIALILWFTVLFANFAEAIAE GRGRAQADSLKMARKDVLARKLKNIDDKTDVIEIASNDLKKGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIR ESGGDRSAVTGGTTLVSDWLVVRVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILLVTLSIIFLAVSATLLPFTEFAS KQAGAGSAISITNVIALLVCLAPTTIGALLSSIGIAGMSRLNQANVLAMSGRAIEAAGDVDVLLLDKTGTITLGNRKASE FLPVDGVTEQELADAAQLSSIADETAEGRSIVVLAKERFDIRGRDFAEMHAEFVPFTATTRMSGIDYQENTIRKGAADAV RAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNKVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAI AAEAGVDDFLAEATPEAKLELIREYQREGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTKLIDI VRIGKQLLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPQLEALNLMGLTSPTSAILSAIIYNAVIIIILIPLSLKGVKY REMPAGKLLSRNMLIYGLGGLIAPFIAIKLIDMLLTVLGIV >Mature_681_residues MMEKGIWKDALIQSTKKLSPKLQVKNPVMLLVYVGAILATSLYFLGFFGISDEKSGYTLAIALILWFTVLFANFAEAIAE GRGRAQADSLKMARKDVLARKLKNIDDKTDVIEIASNDLKKGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIR ESGGDRSAVTGGTTLVSDWLVVRVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILLVTLSIIFLAVSATLLPFTEFAS KQAGAGSAISITNVIALLVCLAPTTIGALLSSIGIAGMSRLNQANVLAMSGRAIEAAGDVDVLLLDKTGTITLGNRKASE FLPVDGVTEQELADAAQLSSIADETAEGRSIVVLAKERFDIRGRDFAEMHAEFVPFTATTRMSGIDYQENTIRKGAADAV RAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNKVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAI AAEAGVDDFLAEATPEAKLELIREYQREGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTKLIDI VRIGKQLLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPQLEALNLMGLTSPTSAILSAIIYNAVIIIILIPLSLKGVKY REMPAGKLLSRNMLIYGLGGLIAPFIAIKLIDMLLTVLGIV
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions [H]
COG id: COG2216
COG function: function code P; High-affinity K+ transport system, ATPase chain B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=495, Percent_Identity=27.8787878787879, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI115529486, Length=558, Percent_Identity=27.4193548387097, Blast_Score=152, Evalue=1e-36, Organism=Homo sapiens, GI55743073, Length=473, Percent_Identity=27.906976744186, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI48762687, Length=678, Percent_Identity=22.5663716814159, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI48762691, Length=678, Percent_Identity=22.5663716814159, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI48762685, Length=678, Percent_Identity=22.5663716814159, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI48762689, Length=678, Percent_Identity=22.5663716814159, Blast_Score=102, Evalue=2e-21, Organism=Homo sapiens, GI118498343, Length=595, Percent_Identity=22.8571428571429, Blast_Score=96, Evalue=2e-19, Organism=Homo sapiens, GI28373105, Length=183, Percent_Identity=26.2295081967213, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI28373115, Length=183, Percent_Identity=26.2295081967213, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI28373111, Length=183, Percent_Identity=26.2295081967213, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI28373107, Length=183, Percent_Identity=26.2295081967213, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI28373113, Length=183, Percent_Identity=26.2295081967213, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI28373109, Length=183, Percent_Identity=26.2295081967213, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI28373103, Length=183, Percent_Identity=26.2295081967213, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1786914, Length=673, Percent_Identity=65.8246656760773, Blast_Score=856, Evalue=0.0, Organism=Escherichia coli, GI1789879, Length=519, Percent_Identity=31.0211946050096, Blast_Score=162, Evalue=7e-41, Organism=Escherichia coli, GI1786691, Length=156, Percent_Identity=38.4615384615385, Blast_Score=108, Evalue=8e-25, Organism=Escherichia coli, GI2367363, Length=572, Percent_Identity=24.6503496503496, Blast_Score=99, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71997262, Length=572, Percent_Identity=24.6503496503496, Blast_Score=92, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71997275, Length=572, Percent_Identity=24.6503496503496, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17556548, Length=136, Percent_Identity=35.2941176470588, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17559224, Length=219, Percent_Identity=24.6575342465753, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI193210130, Length=214, Percent_Identity=28.0373831775701, Blast_Score=76, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71988506, Length=214, Percent_Identity=28.0373831775701, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17554158, Length=214, Percent_Identity=28.0373831775701, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17557486, Length=185, Percent_Identity=29.1891891891892, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17557770, Length=213, Percent_Identity=26.2910798122066, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI32566766, Length=213, Percent_Identity=26.2910798122066, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17531459, Length=137, Percent_Identity=28.4671532846715, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6320475, Length=481, Percent_Identity=26.6112266112266, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6325221, Length=551, Percent_Identity=24.8638838475499, Blast_Score=107, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6321430, Length=547, Percent_Identity=24.1316270566728, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6319772, Length=538, Percent_Identity=24.7211895910781, Blast_Score=104, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6321271, Length=596, Percent_Identity=22.8187919463087, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI221329854, Length=161, Percent_Identity=35.4037267080745, Blast_Score=96, Evalue=8e-20, Organism=Drosophila melanogaster, GI281366676, Length=222, Percent_Identity=27.027027027027, Blast_Score=82, Evalue=2e-15, Organism=Drosophila melanogaster, GI24668708, Length=154, Percent_Identity=31.8181818181818, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24668704, Length=154, Percent_Identity=31.8181818181818, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI281366617, Length=154, Percent_Identity=31.8181818181818, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24668696, Length=154, Percent_Identity=31.8181818181818, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI161085803, Length=155, Percent_Identity=31.6129032258064, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR000695 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006391 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00702 Hydrolase [H]
EC number: =3.6.3.12 [H]
Molecular weight: Translated: 72369; Mature: 72369
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00154 ATPASE_E1_E2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEKGIWKDALIQSTKKLSPKLQVKNPVMLLVYVGAILATSLYFLGFFGISDEKSGYTLA CCCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH IALILWFTVLFANFAEAIAEGRGRAQADSLKMARKDVLARKLKNIDDKTDVIEIASNDLK HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC KGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIRESGGDRSAVTGGTTLVSDWL CCCEEEEEECCCCCCCCHHHCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCEE VVRVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILLVTLSIIFLAVSATLLPFTEFAS EEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KQAGAGSAISITNVIALLVCLAPTTIGALLSSIGIAGMSRLNQANVLAMSGRAIEAAGDV CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCE DVLLLDKTGTITLGNRKASEFLPVDGVTEQELADAAQLSSIADETAEGRSIVVLAKERFD EEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC IRGRDFAEMHAEFVPFTATTRMSGIDYQENTIRKGAADAVRAYVTANGGTYPKECDAIVS CCCCCHHHHHHHHCCEEEECCCCCCCCCHHHHHCCHHHHEEEEEEECCCCCHHHHHHHHH KVAGAGGTPLVVVRNNKVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAI HHCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH AAEAGVDDFLAEATPEAKLELIREYQREGHLVAMTGDGTNDAPALAQADVAVAMNTGTQA HHHCCHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCEEEEECCCHHH AKEAGNMVDLDSSPTKLIDIVRIGKQLLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPQ HHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH LEALNLMGLTSPTSAILSAIIYNAVIIIILIPLSLKGVKYREMPAGKLLSRNMLIYGLGG HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHCCCCEEEHHH LIAPFIAIKLIDMLLTVLGIV HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMEKGIWKDALIQSTKKLSPKLQVKNPVMLLVYVGAILATSLYFLGFFGISDEKSGYTLA CCCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH IALILWFTVLFANFAEAIAEGRGRAQADSLKMARKDVLARKLKNIDDKTDVIEIASNDLK HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC KGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIRESGGDRSAVTGGTTLVSDWL CCCEEEEEECCCCCCCCHHHCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCEE VVRVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILLVTLSIIFLAVSATLLPFTEFAS EEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KQAGAGSAISITNVIALLVCLAPTTIGALLSSIGIAGMSRLNQANVLAMSGRAIEAAGDV CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCE DVLLLDKTGTITLGNRKASEFLPVDGVTEQELADAAQLSSIADETAEGRSIVVLAKERFD EEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC IRGRDFAEMHAEFVPFTATTRMSGIDYQENTIRKGAADAVRAYVTANGGTYPKECDAIVS CCCCCHHHHHHHHCCEEEECCCCCCCCCHHHHHCCHHHHEEEEEEECCCCCHHHHHHHHH KVAGAGGTPLVVVRNNKVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAI HHCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH AAEAGVDDFLAEATPEAKLELIREYQREGHLVAMTGDGTNDAPALAQADVAVAMNTGTQA HHHCCHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCEEEEECCCHHH AKEAGNMVDLDSSPTKLIDIVRIGKQLLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPQ HHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH LEALNLMGLTSPTSAILSAIIYNAVIIIILIPLSLKGVKYREMPAGKLLSRNMLIYGLGG HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHCCCCEEEHHH LIAPFIAIKLIDMLLTVLGIV HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]