| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is mtlR [H]
Identifier: 226225196
GI number: 226225196
Start: 2689485
End: 2691551
Strand: Reverse
Name: mtlR [H]
Synonym: Lm4b_02618
Alternate gene names: 226225196
Gene position: 2691551-2689485 (Counterclockwise)
Preceding gene: 226225197
Following gene: 226225195
Centisome position: 92.41
GC content: 38.66
Gene sequence:
>2067_bases GTGGTACAATTTGATGCTCGAAATATGGCGTTGCTCGAATCACTCGTTGTGGCGAATGTATATCTTGCACCCGAGAAATT ACAAGAAGAACTAGGAATTTCCAAACGAACACTTCAATATGATGTGGAAAAAATTAATAAAGAATTAGATAATATAGGAC TCGATGGTATTCAATCTGTTCGTGGACAAGGGTATTATTTATTAGAAGATGAAAAATCGACAATTAAAGAAATCCTTGGA AATAGGGAAGCGAGCCACAAAGTCTTTTCAGCAAGTGAGCGTCGCATCCGTATTTTATTTTTTCTGCTCGTAACAGATGC GCGAGTAATCATTGATACGATTAATGAATGCAATGAAGTCAGTCGTAATACAAGTTTGCAGGACATTAAACAATTAAAAT TAGCGCTAAAACAGTTTAATTTAGAACTTGCGTATGACCGTAAAAATGGCAATATGGTTCTCGGTGATGAGCGCAGTATT CGCCAATTTTTTATTCACTATTGTATGAATAACGAAGAAATCGCAACCGCAGACCAGTTGCTCGATTTAATGAAAATTAA TCCGATGATAAAAAATCAGGAGTTATTTCACAAATTAGATACGATTTTCGAAATTTTAGCAGTAACGGAGAAAAAAATCG GAATTCGTTATACTGACGAGGTCCTTGAGCGCATTGGTATTATGATTTTCTTCTTTAAAGAACGAATGAAGCGTAATTGC TATTTAAATGAACAAGAAGAGCATGAAGTAGAATCTTTTGAGATTGCGCAGGAAATTTATCAGCAATTGCAGCAAAGTGA GAATTTTAAAATCAATCATGCGGAAATCACTTATTTAGGTAAACTTTTGCTTGGGGCGAGTCGTTTGAATGATGATGCGG CTGCTGAAGGAAAATTAGATCTCATCGTTGAAAAAATCATCGCCGAATTTGAACGTCTTGCTTGCGTGAATTTTGAAGAC CATCGCAATTTGAAAAAAGATTTATTGCTTCATTTACAACCAGCCTACTATCGGCTTAAATTCCAAATTGAGTGGATTAA CCCGCTAAGGACAGACATTAAACAAAGTTACAGTGATGTGTACGAGATTACGAAAAAATCACTCGAACCGCTAGAAGATT TACTTGGTGAAACAATTCCAGAGGATGAAATAGCGTACGTAACAATCTTGTTCGGTGGCTATCTTTCACGCAAAAATAAT ACTTTAGTTGAACGAAAAAAACTCTTAATCGTTTGCTCCAAAGGTGTCGGAACGTCGCGGATGATTGAACGGCAATTATC GCAATTACTTGGTGAGCGAGTAGAGATATTAGAACCAATTTCCATCCGTGAATTTGAAAAAGGGTTATACGCACCAGACT TTATTGTGTCGACTTTGCCAATTATGGAACCAAAAGCACCAGTTTTTATCGTTAGTCCAATTTTGACAGAAGCGCAGAAA CAACAACTGATGAAGGCGATTGCCCCGCACATTTTGCAAAAGGACTCGGATGCGCGCATGTTGTCTTCTGTGCTTGATGT AGTAGATCAATATGCCAAAGTGGAAGACCGCGAGAAATTGGCGGCAAAACTGAAATCGGTATTGTTCCAAGTGCAATCAG ACAGCCAACTAGAAAAATCTCCAACACTCGAAGAACTTTTACCGAAAGAACGAATTACTTTTAAAGAAAGTGTGGCGGAC TGGCGTGAAGCTATCCTAGTTGCCTCGAAATCGCTGCAACAAGAAGGCTACATTTCGAGAAATTATCAGCATGCGATGAT TGAAAATATTGAGAAACTCGGACCATACATCGTTATTGCGCCAGGGATTGCACTGCCACATGCGTCTGTGGATGACGGGG CATACCGAGTCGGAATGAGCTTACTGCGCTTAAATCAGCCAGTATCATTTTCAAGTAAAGCGAAAGATCAAGTGAAGTTA ATTATTGTGCTCGCTTCCATTGACTCCTACACACATATTAATGCGCTGAGCCAACTCACTAATTTAATCATGAAACATCA CTTGCTAGAGCAGATTGAACAAGCGACATCAGCAGCGGAAATTGCCGCAATGTTAACGATACAATAA
Upstream 100 bases:
>100_bases CCTGAAATAAAAATTAACTTGAAAAATATCACATTTTCGCATAACCTTAAAGTAGACATATCTTTTTACCTTCTAGACCG AAATCAAGGAGGTAGGCCAA
Downstream 100 bases:
>100_bases GCAAGAAAGCCAGTGGGGCACCAAGATGCCGCGCTGGCTTTTTGTATGCTCGCTAACAACAAAATGTAACAGTCTATTTT TTGCACTTTCGAAAAGAAAG
Product: transcriptional antiterminator
Products: NA
Alternate protein names: Mannitol operon transcriptional activator; Mtl operon transcriptional activator; Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 688; Mature: 688
Protein sequence:
>688_residues MVQFDARNMALLESLVVANVYLAPEKLQEELGISKRTLQYDVEKINKELDNIGLDGIQSVRGQGYYLLEDEKSTIKEILG NREASHKVFSASERRIRILFFLLVTDARVIIDTINECNEVSRNTSLQDIKQLKLALKQFNLELAYDRKNGNMVLGDERSI RQFFIHYCMNNEEIATADQLLDLMKINPMIKNQELFHKLDTIFEILAVTEKKIGIRYTDEVLERIGIMIFFFKERMKRNC YLNEQEEHEVESFEIAQEIYQQLQQSENFKINHAEITYLGKLLLGASRLNDDAAAEGKLDLIVEKIIAEFERLACVNFED HRNLKKDLLLHLQPAYYRLKFQIEWINPLRTDIKQSYSDVYEITKKSLEPLEDLLGETIPEDEIAYVTILFGGYLSRKNN TLVERKKLLIVCSKGVGTSRMIERQLSQLLGERVEILEPISIREFEKGLYAPDFIVSTLPIMEPKAPVFIVSPILTEAQK QQLMKAIAPHILQKDSDARMLSSVLDVVDQYAKVEDREKLAAKLKSVLFQVQSDSQLEKSPTLEELLPKERITFKESVAD WREAILVASKSLQQEGYISRNYQHAMIENIEKLGPYIVIAPGIALPHASVDDGAYRVGMSLLRLNQPVSFSSKAKDQVKL IIVLASIDSYTHINALSQLTNLIMKHHLLEQIEQATSAAEIAAMLTIQ
Sequences:
>Translated_688_residues MVQFDARNMALLESLVVANVYLAPEKLQEELGISKRTLQYDVEKINKELDNIGLDGIQSVRGQGYYLLEDEKSTIKEILG NREASHKVFSASERRIRILFFLLVTDARVIIDTINECNEVSRNTSLQDIKQLKLALKQFNLELAYDRKNGNMVLGDERSI RQFFIHYCMNNEEIATADQLLDLMKINPMIKNQELFHKLDTIFEILAVTEKKIGIRYTDEVLERIGIMIFFFKERMKRNC YLNEQEEHEVESFEIAQEIYQQLQQSENFKINHAEITYLGKLLLGASRLNDDAAAEGKLDLIVEKIIAEFERLACVNFED HRNLKKDLLLHLQPAYYRLKFQIEWINPLRTDIKQSYSDVYEITKKSLEPLEDLLGETIPEDEIAYVTILFGGYLSRKNN TLVERKKLLIVCSKGVGTSRMIERQLSQLLGERVEILEPISIREFEKGLYAPDFIVSTLPIMEPKAPVFIVSPILTEAQK QQLMKAIAPHILQKDSDARMLSSVLDVVDQYAKVEDREKLAAKLKSVLFQVQSDSQLEKSPTLEELLPKERITFKESVAD WREAILVASKSLQQEGYISRNYQHAMIENIEKLGPYIVIAPGIALPHASVDDGAYRVGMSLLRLNQPVSFSSKAKDQVKL IIVLASIDSYTHINALSQLTNLIMKHHLLEQIEQATSAAEIAAMLTIQ >Mature_688_residues MVQFDARNMALLESLVVANVYLAPEKLQEELGISKRTLQYDVEKINKELDNIGLDGIQSVRGQGYYLLEDEKSTIKEILG NREASHKVFSASERRIRILFFLLVTDARVIIDTINECNEVSRNTSLQDIKQLKLALKQFNLELAYDRKNGNMVLGDERSI RQFFIHYCMNNEEIATADQLLDLMKINPMIKNQELFHKLDTIFEILAVTEKKIGIRYTDEVLERIGIMIFFFKERMKRNC YLNEQEEHEVESFEIAQEIYQQLQQSENFKINHAEITYLGKLLLGASRLNDDAAAEGKLDLIVEKIIAEFERLACVNFED HRNLKKDLLLHLQPAYYRLKFQIEWINPLRTDIKQSYSDVYEITKKSLEPLEDLLGETIPEDEIAYVTILFGGYLSRKNN TLVERKKLLIVCSKGVGTSRMIERQLSQLLGERVEILEPISIREFEKGLYAPDFIVSTLPIMEPKAPVFIVSPILTEAQK QQLMKAIAPHILQKDSDARMLSSVLDVVDQYAKVEDREKLAAKLKSVLFQVQSDSQLEKSPTLEELLPKERITFKESVAD WREAILVASKSLQQEGYISRNYQHAMIENIEKLGPYIVIAPGIALPHASVDDGAYRVGMSLLRLNQPVSFSSKAKDQVKL IIVLASIDSYTHINALSQLTNLIMKHHLLEQIEQATSAAEIAAMLTIQ
Specific function: Positively regulates the expression of the mtlAFD operon involved in the uptake and catabolism of mannitol [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1789302, Length=114, Percent_Identity=39.4736842105263, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI2367359, Length=122, Percent_Identity=29.5081967213115, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI1790755, Length=132, Percent_Identity=31.0606060606061, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 78855; Mature: 78855
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQFDARNMALLESLVVANVYLAPEKLQEELGISKRTLQYDVEKINKELDNIGLDGIQSV CCEECCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH RGQGYYLLEDEKSTIKEILGNREASHKVFSASERRIRILFFLLVTDARVIIDTINECNEV CCCCEEEEECCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SRNTSLQDIKQLKLALKQFNLELAYDRKNGNMVLGDERSIRQFFIHYCMNNEEIATADQL HCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCHHHHHHHHHHHCCCCCHHHHHHH LDLMKINPMIKNQELFHKLDTIFEILAVTEKKIGIRYTDEVLERIGIMIFFFKERMKRNC HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCC YLNEQEEHEVESFEIAQEIYQQLQQSENFKINHAEITYLGKLLLGASRLNDDAAAEGKLD CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHH LIVEKIIAEFERLACVNFEDHRNLKKDLLLHLQPAYYRLKFQIEWINPLRTDIKQSYSDV HHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHH YEITKKSLEPLEDLLGETIPEDEIAYVTILFGGYLSRKNNTLVERKKLLIVCSKGVGTSR HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCCCHHHHHCEEEEEECCCCCHHH MIERQLSQLLGERVEILEPISIREFEKGLYAPDFIVSTLPIMEPKAPVFIVSPILTEAQK HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEECHHHHHHHH QQLMKAIAPHILQKDSDARMLSSVLDVVDQYAKVEDREKLAAKLKSVLFQVQSDSQLEKS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PTLEELLPKERITFKESVADWREAILVASKSLQQEGYISRNYQHAMIENIEKLGPYIVIA CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEE PGIALPHASVDDGAYRVGMSLLRLNQPVSFSSKAKDQVKLIIVLASIDSYTHINALSQLT CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHH NLIMKHHLLEQIEQATSAAEIAAMLTIQ HHHHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MVQFDARNMALLESLVVANVYLAPEKLQEELGISKRTLQYDVEKINKELDNIGLDGIQSV CCEECCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH RGQGYYLLEDEKSTIKEILGNREASHKVFSASERRIRILFFLLVTDARVIIDTINECNEV CCCCEEEEECCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SRNTSLQDIKQLKLALKQFNLELAYDRKNGNMVLGDERSIRQFFIHYCMNNEEIATADQL HCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCHHHHHHHHHHHCCCCCHHHHHHH LDLMKINPMIKNQELFHKLDTIFEILAVTEKKIGIRYTDEVLERIGIMIFFFKERMKRNC HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCC YLNEQEEHEVESFEIAQEIYQQLQQSENFKINHAEITYLGKLLLGASRLNDDAAAEGKLD CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHH LIVEKIIAEFERLACVNFEDHRNLKKDLLLHLQPAYYRLKFQIEWINPLRTDIKQSYSDV HHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHH YEITKKSLEPLEDLLGETIPEDEIAYVTILFGGYLSRKNNTLVERKKLLIVCSKGVGTSR HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCCCHHHHHCEEEEEECCCCCHHH MIERQLSQLLGERVEILEPISIREFEKGLYAPDFIVSTLPIMEPKAPVFIVSPILTEAQK HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEECHHHHHHHH QQLMKAIAPHILQKDSDARMLSSVLDVVDQYAKVEDREKLAAKLKSVLFQVQSDSQLEKS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PTLEELLPKERITFKESVADWREAILVASKSLQQEGYISRNYQHAMIENIEKLGPYIVIA CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEE PGIALPHASVDDGAYRVGMSLLRLNQPVSFSSKAKDQVKLIIVLASIDSYTHINALSQLT CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHH NLIMKHHLLEQIEQATSAAEIAAMLTIQ HHHHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]