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The map label for this gene is inlI [H]

Identifier: 226225018

GI number: 226225018

Start: 2517005

End: 2518171

Strand: Direct

Name: inlI [H]

Synonym: Lm4b_02439

Alternate gene names: 226225018

Gene position: 2517005-2518171 (Clockwise)

Preceding gene: 226225016

Following gene: 226225064

Centisome position: 86.42

GC content: 32.73

Gene sequence:

>1167_bases
TTGAGAAAAGTTTTCATGTTTTTAAGCACAGCTTTATTATTAGCCATTTTGTCACTAAGCTTTACTGGTTTAGATCTGAA
GGCAAAAGCTGCTTCTGATTTATATCCACTACCTGCTCCAATTATTGATGTTTTCCCAGATGATGGATTAGCCAAAGATA
TGGCTAGAAACTTAAACAAAGACTCTGTGAATGATGTTATTGATCAAGATGATTTGGATGCATTAACTAGTTTAGGATTT
GAAACACATACGATTACGAATGATTCCATGCAATTACTAGAGCGTGCCATGTTTAACAATGTCACAGATGTAAGTATTAT
GGAATTTGGGGCTAAATTAACGGAGTTCCCTGATATTACTACAATTCCACATTTAAAAACGTTATTTTTTGCTGATTCAC
CTGGAAGATTAACTAGAAACTTATCCCTTCCAAACTACCAAAATTATCCTGAAATGGATACCATTACAATGAGCGGAAAT
AATTTAGTCGGCTCTATCCCTGACTTTACCGGGATGCCTGCTTTAAAACAGCTTTATATGTCTGATATGTCAATTACAAG
CGATGAACTTCCTAATTTTAATAATATTCCTTTACTTATTACGTTGGATCTAAGTTCTAACCAATTGACAACTATTCCTG
ATTTTCAAAATATACCAAATCTCACATTTTTAGATTTAAATGCAAATTTATTAACCAATACACCAGATTTTCAAAATTTA
CCTAACTTAACTGATTTAAATTTAAGACATAACAATTTAACCGGTACGATGGTTAACTACACCAACTTACCTAGTTTAGA
ATCATTAAACTTAGATTATAATTTTTTAACTGAACTACCTTCTAATGTATTAGATACTATTTATGTTCAAAGTCAAAATG
GAGAGCTTCCTGATCAAACTATTAATCAGGGCAATACATGTACTATTGATTTACCTATTTATTTCCAAATGGAAGAAATT
AACATGTTAGTCAGCCCAGAAGTTACAGGAGAATATATCGGGACTAATATAGTCCAACTTCCGACGACAGTTAATGCGGA
GGACAACTCTATAACAGTGGATACATCCGCTCTAAGTCCTGGTGAGTATAAATTAGACATCTCGTATAATCACAATTATG
CCACTGGAGGCGTATGCTCTTATGATTGGAATGTAACTATTAATTAA

Upstream 100 bases:

>100_bases
TAGATTTTCGTACAAAAAATGTTCATATATGGTGTAAATATTTTTTCTTGGTTTTTTCGTGTTATCCTTTAGACCTCTAA
AAAAGAAAGGACTGAATACA

Downstream 100 bases:

>100_bases
TTTCTACTAAAAAAGCTGGAAGTTCAAAAACTCTGAACTTCCAGCTTTTTATTTATTTCCACGCGCGTGAATATTGTTTT
GGTCCTTCAATTGTTTCGCC

Product: internalin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRKVFMFLSTALLLAILSLSFTGLDLKAKAASDLYPLPAPIIDVFPDDGLAKDMARNLNKDSVNDVIDQDDLDALTSLGF
ETHTITNDSMQLLERAMFNNVTDVSIMEFGAKLTEFPDITTIPHLKTLFFADSPGRLTRNLSLPNYQNYPEMDTITMSGN
NLVGSIPDFTGMPALKQLYMSDMSITSDELPNFNNIPLLITLDLSSNQLTTIPDFQNIPNLTFLDLNANLLTNTPDFQNL
PNLTDLNLRHNNLTGTMVNYTNLPSLESLNLDYNFLTELPSNVLDTIYVQSQNGELPDQTINQGNTCTIDLPIYFQMEEI
NMLVSPEVTGEYIGTNIVQLPTTVNAEDNSITVDTSALSPGEYKLDISYNHNYATGGVCSYDWNVTIN

Sequences:

>Translated_388_residues
MRKVFMFLSTALLLAILSLSFTGLDLKAKAASDLYPLPAPIIDVFPDDGLAKDMARNLNKDSVNDVIDQDDLDALTSLGF
ETHTITNDSMQLLERAMFNNVTDVSIMEFGAKLTEFPDITTIPHLKTLFFADSPGRLTRNLSLPNYQNYPEMDTITMSGN
NLVGSIPDFTGMPALKQLYMSDMSITSDELPNFNNIPLLITLDLSSNQLTTIPDFQNIPNLTFLDLNANLLTNTPDFQNL
PNLTDLNLRHNNLTGTMVNYTNLPSLESLNLDYNFLTELPSNVLDTIYVQSQNGELPDQTINQGNTCTIDLPIYFQMEEI
NMLVSPEVTGEYIGTNIVQLPTTVNAEDNSITVDTSALSPGEYKLDISYNHNYATGGVCSYDWNVTIN
>Mature_388_residues
MRKVFMFLSTALLLAILSLSFTGLDLKAKAASDLYPLPAPIIDVFPDDGLAKDMARNLNKDSVNDVIDQDDLDALTSLGF
ETHTITNDSMQLLERAMFNNVTDVSIMEFGAKLTEFPDITTIPHLKTLFFADSPGRLTRNLSLPNYQNYPEMDTITMSGN
NLVGSIPDFTGMPALKQLYMSDMSITSDELPNFNNIPLLITLDLSSNQLTTIPDFQNIPNLTFLDLNANLLTNTPDFQNL
PNLTDLNLRHNNLTGTMVNYTNLPSLESLNLDYNFLTELPSNVLDTIYVQSQNGELPDQTINQGNTCTIDLPIYFQMEEI
NMLVSPEVTGEYIGTNIVQLPTTVNAEDNSITVDTSALSPGEYKLDISYNHNYATGGVCSYDWNVTIN

Specific function: Unknown. A role in virulence could not be demonstrated [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 MucBP domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014755
- InterPro:   IPR014756
- InterPro:   IPR001611
- InterPro:   IPR019931
- InterPro:   IPR012569
- InterPro:   IPR000601
- InterPro:   IPR001899 [H]

Pfam domain/function: PF00560 LRR_1; PF08191 LRR_adjacent [H]

EC number: NA

Molecular weight: Translated: 43073; Mature: 43073

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVFMFLSTALLLAILSLSFTGLDLKAKAASDLYPLPAPIIDVFPDDGLAKDMARNLNK
CCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEECCCCCHHHHHHHCCCC
DSVNDVIDQDDLDALTSLGFETHTITNDSMQLLERAMFNNVTDVSIMEFGAKLTEFPDIT
CHHHHHCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCHHHCCCCCC
TIPHLKTLFFADSPGRLTRNLSLPNYQNYPEMDTITMSGNNLVGSIPDFTGMPALKQLYM
CCCCEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHH
SDMSITSDELPNFNNIPLLITLDLSSNQLTTIPDFQNIPNLTFLDLNANLLTNTPDFQNL
HCCCCCHHCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCEEEEEECCCEECCCCCCCCC
PNLTDLNLRHNNLTGTMVNYTNLPSLESLNLDYNFLTELPSNVLDTIYVQSQNGELPDQT
CCCEEEEEECCCCCEEEEEECCCCCCEECCCCHHHHHHCHHHHEEEEEEECCCCCCCHHH
INQGNTCTIDLPIYFQMEEINMLVSPEVTGEYIGTNIVQLPTTVNAEDNSITVDTSALSP
HCCCCEEEEEEEEEEEEECCCEEECCCCCCHHHCCCEEECCEEECCCCCEEEEEECCCCC
GEYKLDISYNHNYATGGVCSYDWNVTIN
CCEEEEEEECCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MRKVFMFLSTALLLAILSLSFTGLDLKAKAASDLYPLPAPIIDVFPDDGLAKDMARNLNK
CCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEECCCCCHHHHHHHCCCC
DSVNDVIDQDDLDALTSLGFETHTITNDSMQLLERAMFNNVTDVSIMEFGAKLTEFPDIT
CHHHHHCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCHHHCCCCCC
TIPHLKTLFFADSPGRLTRNLSLPNYQNYPEMDTITMSGNNLVGSIPDFTGMPALKQLYM
CCCCEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHH
SDMSITSDELPNFNNIPLLITLDLSSNQLTTIPDFQNIPNLTFLDLNANLLTNTPDFQNL
HCCCCCHHCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCEEEEEECCCEECCCCCCCCC
PNLTDLNLRHNNLTGTMVNYTNLPSLESLNLDYNFLTELPSNVLDTIYVQSQNGELPDQT
CCCEEEEEECCCCCEEEEEECCCCCCEECCCCHHHHHHCHHHHEEEEEEECCCCCCCHHH
INQGNTCTIDLPIYFQMEEINMLVSPEVTGEYIGTNIVQLPTTVNAEDNSITVDTSALSP
HCCCCEEEEEEEEEEEEECCCEEECCCCCCHHHCCCEEECCEEECCCCCEEEEEECCCCC
GEYKLDISYNHNYATGGVCSYDWNVTIN
CCEEEEEEECCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]