| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224964
Identifier: 226224964
GI number: 226224964
Start: 2458715
End: 2459791
Strand: Direct
Name: 226224964
Synonym: Lm4b_02385
Alternate gene names: NA
Gene position: 2458715-2459791 (Clockwise)
Preceding gene: 226224956
Following gene: 226224979
Centisome position: 84.41
GC content: 34.91
Gene sequence:
>1077_bases ATGAAGAAAGCAATAATGGCTGCGACCATCTTTGTATTGCTTTTAGCCACGTTATCCGGGTGTAGCTCCCCTAAATCTGA CTTCACTGCCGCCTTGCAAAAAACAGCTGAAAACCGACAATATACAACAAATGTGACATTCCAAGTAAATAACCTCTCAG AAAGTTACATAAAAAAACTTGGTCCTGAAATCGACTTAAATCAACTTAAAAAATCGAACATCCAATATAAAATTTCTGTT GATAGTGATTCCGCATCTTCCTACAGCGCATCTTCTATTCACTGGAAAGGAAAAAAACCACTTGATTTAACAATACATGC ACTTCAAAACAGCGATGACGGAAAAGCTTATATTCCTGTATCTGATTTCTACGACGCTTCTGATAGCATCTCCAGTTTAT TACCGGATTCAGCAGCTAGAATTTTCAACCAGGTACTAGATCAAAACAAAGACTTGGAGTCGAAGTATTTAAACCTATTC GAAACAATTCAAAATTTTTCCAATCAAACAATTGATACAGAAACTGTAGACCGCCAAGCAAAAGTATTGAAAAAAATGGA AGAAACTGCCGGCATTGCGATTTATAGTTATCTAAACGACCTAGATGACCAACACTTCACTTCAAAAGATAATGGTGACA TCGTCCTAAAATTATCTAAAAACGAGATTAGCGATTTAGTTAATTCCGTTATCACCAAACTTGATGATAACGGAAGTGTT GTAGCACTTATTGGAGAAATTGACGGTAGCACTCAAAAAGCAGCAAAGAAAAAATGGAACAATGCTCAAAAAAGTATCCA ATCATCCTTAAAAGCTCTAACAGAAAACAAAGCACAAACATTAGATTTCAAATTAACATTAACTCCTGACAGCAAAAAAG GATTTAGTAAAGCGATTATCACTACTAATTTTGAAGATACCAAAACAAAAGACTTAATGGACTTCACAACAACGATTGAT ATGCTAGACTACGAAAAAGTTCCTCCAATGCCAGAAGGAAAAGAAATTGTATCCAAAAAAGAATTAGATAAAGCCATTTC CGATGGACTGAAATTATATTTAAGTAGCGCTCAATAA
Upstream 100 bases:
>100_bases GTATATCTTATTTATATATGGTATTGTTGTAACGTAACAAAATTGCAACATAATAACTTTTTTGTAATAAACGATTACTT ATTGAAGGAGAATTTAAAAT
Downstream 100 bases:
>100_bases AAAAATCCTTTTACCGAAACGGTAAAAGGATTTTTTCTATTTTATTTATCCACTGGAACAACAGCGCCGTCCCATTCTTT CGTAATGTAATCTTGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKKAIMAATIFVLLLATLSGCSSPKSDFTAALQKTAENRQYTTNVTFQVNNLSESYIKKLGPEIDLNQLKKSNIQYKISV DSDSASSYSASSIHWKGKKPLDLTIHALQNSDDGKAYIPVSDFYDASDSISSLLPDSAARIFNQVLDQNKDLESKYLNLF ETIQNFSNQTIDTETVDRQAKVLKKMEETAGIAIYSYLNDLDDQHFTSKDNGDIVLKLSKNEISDLVNSVITKLDDNGSV VALIGEIDGSTQKAAKKKWNNAQKSIQSSLKALTENKAQTLDFKLTLTPDSKKGFSKAIITTNFEDTKTKDLMDFTTTID MLDYEKVPPMPEGKEIVSKKELDKAISDGLKLYLSSAQ
Sequences:
>Translated_358_residues MKKAIMAATIFVLLLATLSGCSSPKSDFTAALQKTAENRQYTTNVTFQVNNLSESYIKKLGPEIDLNQLKKSNIQYKISV DSDSASSYSASSIHWKGKKPLDLTIHALQNSDDGKAYIPVSDFYDASDSISSLLPDSAARIFNQVLDQNKDLESKYLNLF ETIQNFSNQTIDTETVDRQAKVLKKMEETAGIAIYSYLNDLDDQHFTSKDNGDIVLKLSKNEISDLVNSVITKLDDNGSV VALIGEIDGSTQKAAKKKWNNAQKSIQSSLKALTENKAQTLDFKLTLTPDSKKGFSKAIITTNFEDTKTKDLMDFTTTID MLDYEKVPPMPEGKEIVSKKELDKAISDGLKLYLSSAQ >Mature_358_residues MKKAIMAATIFVLLLATLSGCSSPKSDFTAALQKTAENRQYTTNVTFQVNNLSESYIKKLGPEIDLNQLKKSNIQYKISV DSDSASSYSASSIHWKGKKPLDLTIHALQNSDDGKAYIPVSDFYDASDSISSLLPDSAARIFNQVLDQNKDLESKYLNLF ETIQNFSNQTIDTETVDRQAKVLKKMEETAGIAIYSYLNDLDDQHFTSKDNGDIVLKLSKNEISDLVNSVITKLDDNGSV VALIGEIDGSTQKAAKKKWNNAQKSIQSSLKALTENKAQTLDFKLTLTPDSKKGFSKAIITTNFEDTKTKDLMDFTTTID MLDYEKVPPMPEGKEIVSKKELDKAISDGLKLYLSSAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39651; Mature: 39651
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAIMAATIFVLLLATLSGCSSPKSDFTAALQKTAENRQYTTNVTFQVNNLSESYIKKL CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHC GPEIDLNQLKKSNIQYKISVDSDSASSYSASSIHWKGKKPLDLTIHALQNSDDGKAYIPV CCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEECH SDFYDASDSISSLLPDSAARIFNQVLDQNKDLESKYLNLFETIQNFSNQTIDTETVDRQA HHHCCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH KVLKKMEETAGIAIYSYLNDLDDQHFTSKDNGDIVLKLSKNEISDLVNSVITKLDDNGSV HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCE VALIGEIDGSTQKAAKKKWNNAQKSIQSSLKALTENKAQTLDFKLTLTPDSKKGFSKAII EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEE TTNFEDTKTKDLMDFTTTIDMLDYEKVPPMPEGKEIVSKKELDKAISDGLKLYLSSAQ EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKAIMAATIFVLLLATLSGCSSPKSDFTAALQKTAENRQYTTNVTFQVNNLSESYIKKL CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHC GPEIDLNQLKKSNIQYKISVDSDSASSYSASSIHWKGKKPLDLTIHALQNSDDGKAYIPV CCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEECH SDFYDASDSISSLLPDSAARIFNQVLDQNKDLESKYLNLFETIQNFSNQTIDTETVDRQA HHHCCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH KVLKKMEETAGIAIYSYLNDLDDQHFTSKDNGDIVLKLSKNEISDLVNSVITKLDDNGSV HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCE VALIGEIDGSTQKAAKKKWNNAQKSIQSSLKALTENKAQTLDFKLTLTPDSKKGFSKAII EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEE TTNFEDTKTKDLMDFTTTIDMLDYEKVPPMPEGKEIVSKKELDKAISDGLKLYLSSAQ EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA