| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224956
Identifier: 226224956
GI number: 226224956
Start: 2451355
End: 2451720
Strand: Direct
Name: 226224956
Synonym: Lm4b_02377
Alternate gene names: NA
Gene position: 2451355-2451720 (Clockwise)
Preceding gene: 226224955
Following gene: 226224964
Centisome position: 84.16
GC content: 39.07
Gene sequence:
>366_bases ATGGCAGAGAAAAAAGAAGAAATGTACCGCGTGGAGCTAATTGTTAGCGCACTGCTACGAATCGGTGTTGTCCTCAGTGC GATTATTATTGTTTTCGGTCTTGTTATGCTATTTATCACCGGCGAAAGTGGCTATCCTGGGGAAACTTATCCAACCTCGC TTACGGCGATTTTCAGCGGGCTAGGGACGCTTAAACCATACGCGATTATGATGTTTGGCCTCTTTTGCTTAATTTTAACG CCCGTCCTTCGTGTCGTTGTATCGTTATTTACTTTTTTGAAAGAAAAAGATTATTTGTACGTTGGGATAACTGGGATTGT ATTAATTATTTTAGTTATTAGCTTTTTAATTGGTATAAAAGCATAA
Upstream 100 bases:
>100_bases TATGCAACGTTTAAAAAGCAAAGTTATTCGGATTATTTTTATTCCCGTCATTTTATATGTTGCCTTCCAAATGATTTTAG AAGGATTGGGGTGGATTTAA
Downstream 100 bases:
>100_bases AAAAGATGGCGCTAGCGATGCGCCATCTTTTTTTATTCTGAAAACAAATCCATTTGCATCGGAGCTAAACCTTGAAACTC CACTTGGAGCGCCTTTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MAEKKEEMYRVELIVSALLRIGVVLSAIIIVFGLVMLFITGESGYPGETYPTSLTAIFSGLGTLKPYAIMMFGLFCLILT PVLRVVVSLFTFLKEKDYLYVGITGIVLIILVISFLIGIKA
Sequences:
>Translated_121_residues MAEKKEEMYRVELIVSALLRIGVVLSAIIIVFGLVMLFITGESGYPGETYPTSLTAIFSGLGTLKPYAIMMFGLFCLILT PVLRVVVSLFTFLKEKDYLYVGITGIVLIILVISFLIGIKA >Mature_120_residues AEKKEEMYRVELIVSALLRIGVVLSAIIIVFGLVMLFITGESGYPGETYPTSLTAIFSGLGTLKPYAIMMFGLFCLILTP VLRVVVSLFTFLKEKDYLYVGITGIVLIILVISFLIGIKA
Specific function: Unknown
COG id: COG4272
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13301; Mature: 13169
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKKEEMYRVELIVSALLRIGVVLSAIIIVFGLVMLFITGESGYPGETYPTSLTAIFSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LGTLKPYAIMMFGLFCLILTPVLRVVVSLFTFLKEKDYLYVGITGIVLIILVISFLIGIK HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCC A C >Mature Secondary Structure AEKKEEMYRVELIVSALLRIGVVLSAIIIVFGLVMLFITGESGYPGETYPTSLTAIFSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LGTLKPYAIMMFGLFCLILTPVLRVVVSLFTFLKEKDYLYVGITGIVLIILVISFLIGIK HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA