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The map label for this gene is ohrR [H]

Identifier: 226224808

GI number: 226224808

Start: 2294915

End: 2295367

Strand: Reverse

Name: ohrR [H]

Synonym: Lm4b_02227

Alternate gene names: 226224808

Gene position: 2295367-2294915 (Counterclockwise)

Preceding gene: 226224809

Following gene: 226224807

Centisome position: 78.81

GC content: 34.66

Gene sequence:

>453_bases
TTGGACACGAATACACGCATATTAGAAGAGCAACTATGTTTTTCTGTTTATAATGCATCCAAACAATTTACTAAACTTTA
TCGTGAAGCTTTAGAGCCGTTTCAATTAACCTATCCACAATATATTGCTTTGCTTGTTCTATGGGAAGTTGAAGAACAAA
CTGTATCAGAACTTGGGAAGAGGTTGGCTTTAGATAGTGGAACTTTAACACCTATGTTAAAACGAATGGAGCATTTAGGA
TATGTTACACGGAGTCGTCATCCGGAAGACGAGCGCCGCGTTTATATTCGCTTAACAGAAAAAGCAATAAAAATACAACC
TGACGTATTAAAAAGCGTGGACAACTGCCTTCAATTACTTGATTTCAAAGAATTAGACTACACACAATTACTTACCAAAA
TACAATCGTTAACGAAACAATTAGGAGGAATAGAAAATGAAAAAATTATATGA

Upstream 100 bases:

>100_bases
TCTAAAAATGAGGTAAGGCTTTTTTTGAGCAAAAAACTAGCTTTCATTATTATGATTGGTTACAATTAAATTGTACACAA
CTTAAAAGGAGGAGAACATG

Downstream 100 bases:

>100_bases
AACAACAGTCATTAATACAGGTGGAAGAAGTGGTGAAGTTCATTCGCCAGACAACGTATTTTACTTTGATATTTCTGCGC
CAACAGAACTTGGTGGAGAC

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MDTNTRILEEQLCFSVYNASKQFTKLYREALEPFQLTYPQYIALLVLWEVEEQTVSELGKRLALDSGTLTPMLKRMEHLG
YVTRSRHPEDERRVYIRLTEKAIKIQPDVLKSVDNCLQLLDFKELDYTQLLTKIQSLTKQLGGIENEKII

Sequences:

>Translated_150_residues
MDTNTRILEEQLCFSVYNASKQFTKLYREALEPFQLTYPQYIALLVLWEVEEQTVSELGKRLALDSGTLTPMLKRMEHLG
YVTRSRHPEDERRVYIRLTEKAIKIQPDVLKSVDNCLQLLDFKELDYTQLLTKIQSLTKQLGGIENEKII
>Mature_150_residues
MDTNTRILEEQLCFSVYNASKQFTKLYREALEPFQLTYPQYIALLVLWEVEEQTVSELGKRLALDSGTLTPMLKRMEHLG
YVTRSRHPEDERRVYIRLTEKAIKIQPDVLKSVDNCLQLLDFKELDYTQLLTKIQSLTKQLGGIENEKII

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17582; Mature: 17582

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTNTRILEEQLCFSVYNASKQFTKLYREALEPFQLTYPQYIALLVLWEVEEQTVSELGK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
RLALDSGTLTPMLKRMEHLGYVTRSRHPEDERRVYIRLTEKAIKIQPDVLKSVDNCLQLL
HHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEHHHHHHCCHHHHHHHHHHHHHH
DFKELDYTQLLTKIQSLTKQLGGIENEKII
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDTNTRILEEQLCFSVYNASKQFTKLYREALEPFQLTYPQYIALLVLWEVEEQTVSELGK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
RLALDSGTLTPMLKRMEHLGYVTRSRHPEDERRVYIRLTEKAIKIQPDVLKSVDNCLQLL
HHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEHHHHHHCCHHHHHHHHHHHHHH
DFKELDYTQLLTKIQSLTKQLGGIENEKII
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]