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The map label for this gene is ykuP [H]

Identifier: 226224760

GI number: 226224760

Start: 2236363

End: 2236800

Strand: Reverse

Name: ykuP [H]

Synonym: Lm4b_02178

Alternate gene names: 226224760

Gene position: 2236800-2236363 (Counterclockwise)

Preceding gene: 226224761

Following gene: 226224759

Centisome position: 76.79

GC content: 42.92

Gene sequence:

>438_bases
ATGAGAATTTTGTTAGCCTATGATTCTCTAAGTGGTAATACGAAAATGGTGGCTGATGAAATTGAAGAGATTTTACAAAG
CGAAGGACATGAGGTTGTGTCCTTTCGCGTATCTCCTCTAGCCGAGTATCCGCTTGATGAGGATTTTGACTTGTACGTGT
TGGGGGCATGGACAGTCGACTACGGAAGAACACCGCCGGATATGAAAGATTTTATCGCGGAACTAGCCGTTAAGCCCGAG
AATGTAGCCATTTTTGGTACTGGGGAAACACAATGGGGTATGGAGTTTTATTGCGGAGCTGTTGACCGAATGGCAAAATA
CTTCGGCACAAGCTACCCGACTTTAAAAATAGAACAAATGCCACACACAGAACAAGATGTGGCTGATATAGACAATTGGG
TCAAGAAAATTTTAGCGTTAAGGAGTGGAATCAAATGA

Upstream 100 bases:

>100_bases
AAGCTTACGCAGATAACTTTACAGAAACAAAAACCGACTTTTTCGAAATGCGCAATTCAAGCTATAAAAAAACGAATATG
GATAACGGATTCGACGATTT

Downstream 100 bases:

>100_bases
CAAGTATTGAAATTAAATCACCTGAAGAGTTCCAAGCTCATATAAATGGAGAAGAATTAGTATATGTAGACTATTGGAAA
GATAATTGTCCTAATTGTAA

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MRILLAYDSLSGNTKMVADEIEEILQSEGHEVVSFRVSPLAEYPLDEDFDLYVLGAWTVDYGRTPPDMKDFIAELAVKPE
NVAIFGTGETQWGMEFYCGAVDRMAKYFGTSYPTLKIEQMPHTEQDVADIDNWVKKILALRSGIK

Sequences:

>Translated_145_residues
MRILLAYDSLSGNTKMVADEIEEILQSEGHEVVSFRVSPLAEYPLDEDFDLYVLGAWTVDYGRTPPDMKDFIAELAVKPE
NVAIFGTGETQWGMEFYCGAVDRMAKYFGTSYPTLKIEQMPHTEQDVADIDNWVKKILALRSGIK
>Mature_145_residues
MRILLAYDSLSGNTKMVADEIEEILQSEGHEVVSFRVSPLAEYPLDEDFDLYVLGAWTVDYGRTPPDMKDFIAELAVKPE
NVAIFGTGETQWGMEFYCGAVDRMAKYFGTSYPTLKIEQMPHTEQDVADIDNWVKKILALRSGIK

Specific function: Low-potential electron donor to a number of redox enzymes (Potential) [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010087
- InterPro:   IPR001094
- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 16405; Mature: 16405

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLAYDSLSGNTKMVADEIEEILQSEGHEVVSFRVSPLAEYPLDEDFDLYVLGAWTVD
CEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEC
YGRTPPDMKDFIAELAVKPENVAIFGTGETQWGMEFYCGAVDRMAKYFGTSYPTLKIEQM
CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
PHTEQDVADIDNWVKKILALRSGIK
CCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRILLAYDSLSGNTKMVADEIEEILQSEGHEVVSFRVSPLAEYPLDEDFDLYVLGAWTVD
CEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEC
YGRTPPDMKDFIAELAVKPENVAIFGTGETQWGMEFYCGAVDRMAKYFGTSYPTLKIEQM
CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
PHTEQDVADIDNWVKKILALRSGIK
CCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]