| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is mdxG [H]
Identifier: 226224730
GI number: 226224730
Start: 2205920
End: 2206771
Strand: Reverse
Name: mdxG [H]
Synonym: Lm4b_02147b
Alternate gene names: 226224730
Gene position: 2206771-2205920 (Counterclockwise)
Preceding gene: 226224731
Following gene: 226224729
Centisome position: 75.76
GC content: 41.67
Gene sequence:
>852_bases ATGAGAGACTTTATGAAAGATCAGCGGACAACAAAGTTCTTAACACAGTTTTTCACGTATTTGTTTTTAACCGTGCTAAC GATTATTATTTTGTATCCGATTCTAATAACAGCATCTTCTGCCTTCAAACCAGGGAATATCGCGGCATTTACGCTTGAGT GGTCGGATAGTTGGACGCTGAATAACTTCACGAGATTGTTTAATGAAACATTATATCTTGATTGGTACAAAAATACACTG ATTATCGCGGTTGTAACGATGATTATGCAAGTAACGATTGTGACGCTTGCGGGTTATACGTATAGCCGTTACCGTTTTAA AGGTCGTAAAAACAGCTTGATTTTCTTCCTTATTATTCAAATGGTACCAACGATGGCGGCCTTAACAGCTTTCTACGTGT TAGCGATGCTACTTGGCGCACTTGATCAATATTGGTTCTTAACATTGATTTACATCGGTGGTGGGATTCCGATGAACACA TGGCTGATGAAAGGGTATTTCGATACCGTGCCGCGTGATCTAGATGAATCCGCCAAACTTGATGGCGCAGGACATTTCCG CATTTTCGCTCAAATCATCTTGCCACTTGTTAGACCGATGATTGCCGTTCAAGCTTTATGGGCGTTTATGGGACCGTTTG GGGACTTCCTCCTTGCGAAATTCCTTCTTAGAACACCAGAAAACTTAACGATTGCGGTAGGACTTCAAACGTTCATCGCC AACCCACAACAACAAAAAGTAGCCTTATTCGCAGCGGGCGCCATTTTAGCCGCGCTACCAATTTGTTTACTGTTCTTCTT CTTACAAAAGAATTTTGTTTCTGGCTTAACTGCCGGTGGAACAAAAGGATAA
Upstream 100 bases:
>100_bases AGCTGCTGCTGTGACGCTTCTTATCTCTATTATCGTTATTACTGTTTCGATGATTGCCTTTAAGAAGACGAATGCCTTTG GGAACGAGGAGATGATGTAA
Downstream 100 bases:
>100_bases TTGATTTTTAAAAAGGCTGTGATATCAATGAAAAAAGTTCCGTTTATCATTCAATATGTAAAAAGTACACTCGGTCCAAC CGCTATTTTTGAGGGTCGGA
Product: maltodextrin ABC-transport system (permease)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MRDFMKDQRTTKFLTQFFTYLFLTVLTIIILYPILITASSAFKPGNIAAFTLEWSDSWTLNNFTRLFNETLYLDWYKNTL IIAVVTMIMQVTIVTLAGYTYSRYRFKGRKNSLIFFLIIQMVPTMAALTAFYVLAMLLGALDQYWFLTLIYIGGGIPMNT WLMKGYFDTVPRDLDESAKLDGAGHFRIFAQIILPLVRPMIAVQALWAFMGPFGDFLLAKFLLRTPENLTIAVGLQTFIA NPQQQKVALFAAGAILAALPICLLFFFLQKNFVSGLTAGGTKG
Sequences:
>Translated_283_residues MRDFMKDQRTTKFLTQFFTYLFLTVLTIIILYPILITASSAFKPGNIAAFTLEWSDSWTLNNFTRLFNETLYLDWYKNTL IIAVVTMIMQVTIVTLAGYTYSRYRFKGRKNSLIFFLIIQMVPTMAALTAFYVLAMLLGALDQYWFLTLIYIGGGIPMNT WLMKGYFDTVPRDLDESAKLDGAGHFRIFAQIILPLVRPMIAVQALWAFMGPFGDFLLAKFLLRTPENLTIAVGLQTFIA NPQQQKVALFAAGAILAALPICLLFFFLQKNFVSGLTAGGTKG >Mature_283_residues MRDFMKDQRTTKFLTQFFTYLFLTVLTIIILYPILITASSAFKPGNIAAFTLEWSDSWTLNNFTRLFNETLYLDWYKNTL IIAVVTMIMQVTIVTLAGYTYSRYRFKGRKNSLIFFLIIQMVPTMAALTAFYVLAMLLGALDQYWFLTLIYIGGGIPMNT WLMKGYFDTVPRDLDESAKLDGAGHFRIFAQIILPLVRPMIAVQALWAFMGPFGDFLLAKFLLRTPENLTIAVGLQTFIA NPQQQKVALFAAGAILAALPICLLFFFLQKNFVSGLTAGGTKG
Specific function: Part of the ABC transporter complex involved in maltodextrin import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG3833
COG function: function code G; ABC-type maltose transport systems, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790464, Length=297, Percent_Identity=33.6700336700337, Blast_Score=141, Evalue=5e-35, Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=28.7234042553192, Blast_Score=113, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32018; Mature: 32018
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFMKDQRTTKFLTQFFTYLFLTVLTIIILYPILITASSAFKPGNIAAFTLEWSDSWTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCH NNFTRLFNETLYLDWYKNTLIIAVVTMIMQVTIVTLAGYTYSRYRFKGRKNSLIFFLIIQ HHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCHHHHHHHH MVPTMAALTAFYVLAMLLGALDQYWFLTLIYIGGGIPMNTWLMKGYFDTVPRDLDESAKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHCCC DGAGHFRIFAQIILPLVRPMIAVQALWAFMGPFGDFLLAKFLLRTPENLTIAVGLQTFIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEHHHHHC NPQQQKVALFAAGAILAALPICLLFFFLQKNFVSGLTAGGTKG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRDFMKDQRTTKFLTQFFTYLFLTVLTIIILYPILITASSAFKPGNIAAFTLEWSDSWTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCH NNFTRLFNETLYLDWYKNTLIIAVVTMIMQVTIVTLAGYTYSRYRFKGRKNSLIFFLIIQ HHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCHHHHHHHH MVPTMAALTAFYVLAMLLGALDQYWFLTLIYIGGGIPMNTWLMKGYFDTVPRDLDESAKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHCCC DGAGHFRIFAQIILPLVRPMIAVQALWAFMGPFGDFLLAKFLLRTPENLTIAVGLQTFIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEHHHHHC NPQQQKVALFAAGAILAALPICLLFFFLQKNFVSGLTAGGTKG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]