| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is mdxF [H]
Identifier: 226224731
GI number: 226224731
Start: 2206772
End: 2208079
Strand: Reverse
Name: mdxF [H]
Synonym: Lm4b_02148
Alternate gene names: 226224731
Gene position: 2208079-2206772 (Counterclockwise)
Preceding gene: 226224732
Following gene: 226224730
Centisome position: 75.81
GC content: 37.31
Gene sequence:
>1308_bases ATGAAACTAGAACAAAAACAAATTAAAAATGTTCGTCAAGCGACTTTGTTATCAATCATTCCGGGACTTGGTCAATTTTA TAATAAGCAAAATTTTAAAGGGATTGTCTTTTTCGCACTATTTGCTTTGTTTATCATAGAATTTTTTGCAGTTGGGCTGA ATGCACTGATTGGCCTTGTAACACTTGGATCTGTACCGGGTGTAGACCATTCCTTATTTTTAATGATTGAAGGTACTTTA CAATTAATTGTGACATTACTATTTATAGGCTTTTGGTTTATAAATATTTTCGATGCAAGACGCGTGGCTATGCAGTGGAA CCTAGGTGAAACTGTTAACCGTTCTGCGATTGCTATTATAAAAAATATGCTCGACAAAGGTTTCCCGTACTTACTTACAT TACCTGCATACTTAGTGATGACTTTTGTTATTATTTTCCCAGTTCTTGTTACTCTTTTCATGGCATTTACCAACTATGAT TTTTACCATATTCCGCCAGCGAACTTAATTGACTGGGTTGGATTTAAGAACTTCTTTAATATTTTCTTCCTAAGTTCGTA TCGTGACACGTTCCTAAGCGTATTTTCGTGGACACTCATTTGGACAATCTGTGCCACTTCTTTACAAATTGTCGTTGGTG TATTCACGGCGATTGTTGCGAACCAAAGCTTTATTAAAGGGAAACGTCTTTTTGGGGTAGTTTTCTTACTTCCTTGGGCG GTACCAGCATTTATTACAATTATGAGTTTTTCCAATATGTTTAACGACAGTATTGGCGCAATCAACTCGCAAGTCATTCC ACTTCTAAACCATTTGCCATTTGTTGATATCAATGCGATTGCTTGGAAAACAGATCCTTTCTGGACAAAAGTGGCGCTGA TTAGTATTCAAGGTTGGCTTGGTTTTCCGTATATTTACGTTATGGTTACTGGGGTGCTTCAAGCAATTCCTGGTGAACTA TACGAAGCAGCTAGAATTGATGGTGCAAGTGCGATTCAACGTTTCCGTAAAATTACATTACCGATGATTTTATTTGTAAC CGCGCCGGTATTTATTACGCAATATACATTTAACTTCAACAACTTTTCGATAATATACTTATTCAATGAAGGTGGTCCCG GAAGTGTCGGAGCAGGCGCAGGATCAACCGATATCTTAATTTCATGGATTTATAAATTAACAACAGGTACTTCGCCACAA TACGCTGTAGCTGCTGCTGTGACGCTTCTTATCTCTATTATCGTTATTACTGTTTCGATGATTGCCTTTAAGAAGACGAA TGCCTTTGGGAACGAGGAGATGATGTAA
Upstream 100 bases:
>100_bases ATATACTAAATAATAATGATTTGGCGGGGCAAAGATAGCGCGCTCCGCCATTTTTTTCAACTTAGCTAGTGAATCTATAT CTAGAATTGAGGGTAACAAA
Downstream 100 bases:
>100_bases ATGAGAGACTTTATGAAAGATCAGCGGACAACAAAGTTCTTAACACAGTTTTTCACGTATTTGTTTTTAACCGTGCTAAC GATTATTATTTTGTATCCGA
Product: maltodextrin ABC-transport system (permease)
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MKLEQKQIKNVRQATLLSIIPGLGQFYNKQNFKGIVFFALFALFIIEFFAVGLNALIGLVTLGSVPGVDHSLFLMIEGTL QLIVTLLFIGFWFINIFDARRVAMQWNLGETVNRSAIAIIKNMLDKGFPYLLTLPAYLVMTFVIIFPVLVTLFMAFTNYD FYHIPPANLIDWVGFKNFFNIFFLSSYRDTFLSVFSWTLIWTICATSLQIVVGVFTAIVANQSFIKGKRLFGVVFLLPWA VPAFITIMSFSNMFNDSIGAINSQVIPLLNHLPFVDINAIAWKTDPFWTKVALISIQGWLGFPYIYVMVTGVLQAIPGEL YEAARIDGASAIQRFRKITLPMILFVTAPVFITQYTFNFNNFSIIYLFNEGGPGSVGAGAGSTDILISWIYKLTTGTSPQ YAVAAAVTLLISIIVITVSMIAFKKTNAFGNEEMM
Sequences:
>Translated_435_residues MKLEQKQIKNVRQATLLSIIPGLGQFYNKQNFKGIVFFALFALFIIEFFAVGLNALIGLVTLGSVPGVDHSLFLMIEGTL QLIVTLLFIGFWFINIFDARRVAMQWNLGETVNRSAIAIIKNMLDKGFPYLLTLPAYLVMTFVIIFPVLVTLFMAFTNYD FYHIPPANLIDWVGFKNFFNIFFLSSYRDTFLSVFSWTLIWTICATSLQIVVGVFTAIVANQSFIKGKRLFGVVFLLPWA VPAFITIMSFSNMFNDSIGAINSQVIPLLNHLPFVDINAIAWKTDPFWTKVALISIQGWLGFPYIYVMVTGVLQAIPGEL YEAARIDGASAIQRFRKITLPMILFVTAPVFITQYTFNFNNFSIIYLFNEGGPGSVGAGAGSTDILISWIYKLTTGTSPQ YAVAAAVTLLISIIVITVSMIAFKKTNAFGNEEMM >Mature_435_residues MKLEQKQIKNVRQATLLSIIPGLGQFYNKQNFKGIVFFALFALFIIEFFAVGLNALIGLVTLGSVPGVDHSLFLMIEGTL QLIVTLLFIGFWFINIFDARRVAMQWNLGETVNRSAIAIIKNMLDKGFPYLLTLPAYLVMTFVIIFPVLVTLFMAFTNYD FYHIPPANLIDWVGFKNFFNIFFLSSYRDTFLSVFSWTLIWTICATSLQIVVGVFTAIVANQSFIKGKRLFGVVFLLPWA VPAFITIMSFSNMFNDSIGAINSQVIPLLNHLPFVDINAIAWKTDPFWTKVALISIQGWLGFPYIYVMVTGVLQAIPGEL YEAARIDGASAIQRFRKITLPMILFVTAPVFITQYTFNFNNFSIIYLFNEGGPGSVGAGAGSTDILISWIYKLTTGTSPQ YAVAAAVTLLISIIVITVSMIAFKKTNAFGNEEMM
Specific function: Part of the ABC transporter complex involved in maltodextrin import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790465, Length=259, Percent_Identity=35.9073359073359, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1787570, Length=237, Percent_Identity=29.535864978903, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789861, Length=309, Percent_Identity=27.5080906148867, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 48661; Mature: 48661
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLEQKQIKNVRQATLLSIIPGLGQFYNKQNFKGIVFFALFALFIIEFFAVGLNALIGLV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGSVPGVDHSLFLMIEGTLQLIVTLLFIGFWFINIFDARRVAMQWNLGETVNRSAIAII HHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH KNMLDKGFPYLLTLPAYLVMTFVIIFPVLVTLFMAFTNYDFYHIPPANLIDWVGFKNFFN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH IFFLSSYRDTFLSVFSWTLIWTICATSLQIVVGVFTAIVANQSFIKGKRLFGVVFLLPWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VPAFITIMSFSNMFNDSIGAINSQVIPLLNHLPFVDINAIAWKTDPFWTKVALISIQGWL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECEEEECCCCCHHEEEEEEEECHH GFPYIYVMVTGVLQAIPGELYEAARIDGASAIQRFRKITLPMILFVTAPVFITQYTFNFN HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC NFSIIYLFNEGGPGSVGAGAGSTDILISWIYKLTTGTSPQYAVAAAVTLLISIIVITVSM CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH IAFKKTNAFGNEEMM HHHHHCCCCCCCCCC >Mature Secondary Structure MKLEQKQIKNVRQATLLSIIPGLGQFYNKQNFKGIVFFALFALFIIEFFAVGLNALIGLV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGSVPGVDHSLFLMIEGTLQLIVTLLFIGFWFINIFDARRVAMQWNLGETVNRSAIAII HHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH KNMLDKGFPYLLTLPAYLVMTFVIIFPVLVTLFMAFTNYDFYHIPPANLIDWVGFKNFFN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH IFFLSSYRDTFLSVFSWTLIWTICATSLQIVVGVFTAIVANQSFIKGKRLFGVVFLLPWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VPAFITIMSFSNMFNDSIGAINSQVIPLLNHLPFVDINAIAWKTDPFWTKVALISIQGWL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECEEEECCCCCHHEEEEEEEECHH GFPYIYVMVTGVLQAIPGELYEAARIDGASAIQRFRKITLPMILFVTAPVFITQYTFNFN HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC NFSIIYLFNEGGPGSVGAGAGSTDILISWIYKLTTGTSPQYAVAAAVTLLISIIVITVSM CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH IAFKKTNAFGNEEMM HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]