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The map label for this gene is 226224660

Identifier: 226224660

GI number: 226224660

Start: 2136528

End: 2136809

Strand: Reverse

Name: 226224660

Synonym: Lm4b_02075

Alternate gene names: NA

Gene position: 2136809-2136528 (Counterclockwise)

Preceding gene: 226224661

Following gene: 226224659

Centisome position: 73.36

GC content: 34.4

Gene sequence:

>282_bases
ATGGAAAATGATAGACAAGCTATCGTCGTTTGGATGAATCATCTTAAACAAGTTAGATCTTTGAAGCGATTTGGAAATGT
GCATTATGTATCGCGCAAGTTGAAATATGCGGTATTATATTGTGATATGGCTGAAGTAGAAGATATCTCTAACAAAGTTT
CTCGTTTTCATTATGTGAAACGCGTGGAAATGTCTTTCCGTCCGTTCTTAAAAACAGAATACGAATCCAAAAAAGAAATG
ATGTACGAACACAAAAACGAAGATGTGCAAATCAGTATCTAA

Upstream 100 bases:

>100_bases
TTTTGAAACAAAATCTGCTTGTTCTACAGGTGGATGTGGCAGCGGGGGAGGCTGCGGTTGTTCAGCGTAAAGCTTATCCT
AAAAAGAAGGGGCTTAAACA

Downstream 100 bases:

>100_bases
CCAAAACGGCAAGACTATCTCAACTAGTCTTGCTGTTTTTTTGCTTCTATTTGTGATAAAGTAAAAAAGACATTGAAGTA
AAGGTTGTGCAAAAACATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MENDRQAIVVWMNHLKQVRSLKRFGNVHYVSRKLKYAVLYCDMAEVEDISNKVSRFHYVKRVEMSFRPFLKTEYESKKEM
MYEHKNEDVQISI

Sequences:

>Translated_93_residues
MENDRQAIVVWMNHLKQVRSLKRFGNVHYVSRKLKYAVLYCDMAEVEDISNKVSRFHYVKRVEMSFRPFLKTEYESKKEM
MYEHKNEDVQISI
>Mature_93_residues
MENDRQAIVVWMNHLKQVRSLKRFGNVHYVSRKLKYAVLYCDMAEVEDISNKVSRFHYVKRVEMSFRPFLKTEYESKKEM
MYEHKNEDVQISI

Specific function: Unknown

COG id: COG4471

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0298 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2054_LISMO (P60415)

Other databases:

- EMBL:   AL591982
- PIR:   AF1331
- RefSeq:   NP_465578.1
- GeneID:   984727
- GenomeReviews:   AL591824_GR
- KEGG:   lmo:lmo2054
- GenoList:   LMO2054
- HOGENOM:   HBG694525
- OMA:   DDIFFEN
- ProtClustDB:   PRK02886
- BioCyc:   LMON169963:LMO2054-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01126
- InterPro:   IPR016979
- PIRSF:   PIRSF031653

Pfam domain/function: PF09902 DUF2129

EC number: NA

Molecular weight: Translated: 11350; Mature: 11350

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENDRQAIVVWMNHLKQVRSLKRFGNVHYVSRKLKYAVLYCDMAEVEDISNKVSRFHYVK
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHH
RVEMSFRPFLKTEYESKKEMMYEHKNEDVQISI
HHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure
MENDRQAIVVWMNHLKQVRSLKRFGNVHYVSRKLKYAVLYCDMAEVEDISNKVSRFHYVK
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHH
RVEMSFRPFLKTEYESKKEMMYEHKNEDVQISI
HHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669