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The map label for this gene is ylbF [H]

Identifier: 226224661

GI number: 226224661

Start: 2136840

End: 2137289

Strand: Reverse

Name: ylbF [H]

Synonym: Lm4b_02076

Alternate gene names: 226224661

Gene position: 2137289-2136840 (Counterclockwise)

Preceding gene: 226224662

Following gene: 226224660

Centisome position: 73.38

GC content: 43.11

Gene sequence:

>450_bases
TTGCTCGCTACAATGGAAAATATGGCGCTACTCGATTTATCAGATGAGCTTGCTAGCATGATTCTAAACTCCGAGGAAGC
GCAAAATTATAAACTTGCTAAGGAAGCGTTGCTAAATGACGCTACTTCACAAAAAAATATTCGTCAATTCATACGAATAA
AAGAACAATACGAGGAAGTGCAGCGGTTCGGCCGGTATCATCCTGACTATAAAGAAGTAACCAGAAAGACTCGTGCTTAT
AAACGCGAAGTCGATATGGATCAAAATGTGGCAGCTTTTCGCCGGGCAGAGATGGATTTACAATCTCTCTTGGACGAAAT
CAGCCTGCTTCTCGCAAGTGCAGTTTCAGAGAATATCAAAGTACCAACTGGTAATCCGTTTTTTGAAACAAAATCTGCTT
GTTCTACAGGTGGATGTGGCAGCGGGGGAGGCTGCGGTTGTTCAGCGTAA

Upstream 100 bases:

>100_bases
TGGGTGCGGGAACATATCGAAAATACTATACGCAAAATTTTATTATTAAATAATAGTTCTATGGTATAATAAAAAAGTAA
GTTATATGGAGGTGGCTAGA

Downstream 100 bases:

>100_bases
AGCTTATCCTAAAAAGAAGGGGCTTAAACAATGGAAAATGATAGACAAGCTATCGTCGTTTGGATGAATCATCTTAAACA
AGTTAGATCTTTGAAGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MLATMENMALLDLSDELASMILNSEEAQNYKLAKEALLNDATSQKNIRQFIRIKEQYEEVQRFGRYHPDYKEVTRKTRAY
KREVDMDQNVAAFRRAEMDLQSLLDEISLLLASAVSENIKVPTGNPFFETKSACSTGGCGSGGGCGCSA

Sequences:

>Translated_149_residues
MLATMENMALLDLSDELASMILNSEEAQNYKLAKEALLNDATSQKNIRQFIRIKEQYEEVQRFGRYHPDYKEVTRKTRAY
KREVDMDQNVAAFRRAEMDLQSLLDEISLLLASAVSENIKVPTGNPFFETKSACSTGGCGSGGGCGCSA
>Mature_149_residues
MLATMENMALLDLSDELASMILNSEEAQNYKLAKEALLNDATSQKNIRQFIRIKEQYEEVQRFGRYHPDYKEVTRKTRAY
KREVDMDQNVAAFRRAEMDLQSLLDEISLLLASAVSENIKVPTGNPFFETKSACSTGGCGSGGGCGCSA

Specific function: Regulates sporulation prior to stage II. Positively controls the competence regulator ComK at a post-transcriptional level. May modulate the translation, stability or activity of ComS. May work together with YmcA to regulate community development [H]

COG id: COG3679

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010368 [H]

Pfam domain/function: PF06133 DUF964 [H]

EC number: NA

Molecular weight: Translated: 16599; Mature: 16599

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATMENMALLDLSDELASMILNSEEAQNYKLAKEALLNDATSQKNIRQFIRIKEQYEEV
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QRFGRYHPDYKEVTRKTRAYKREVDMDQNVAAFRRAEMDLQSLLDEISLLLASAVSENIK
HHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VPTGNPFFETKSACSTGGCGSGGGCGCSA
CCCCCCCCCCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLATMENMALLDLSDELASMILNSEEAQNYKLAKEALLNDATSQKNIRQFIRIKEQYEEV
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QRFGRYHPDYKEVTRKTRAYKREVDMDQNVAAFRRAEMDLQSLLDEISLLLASAVSENIK
HHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VPTGNPFFETKSACSTGGCGSGGGCGCSA
CCCCCCCCCCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10712692 [H]