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The map label for this gene is rpmF

Identifier: 226224653

GI number: 226224653

Start: 2129863

End: 2130036

Strand: Reverse

Name: rpmF

Synonym: Lm4b_02068

Alternate gene names: 226224653

Gene position: 2130036-2129863 (Counterclockwise)

Preceding gene: 226224654

Following gene: 226224652

Centisome position: 73.13

GC content: 43.68

Gene sequence:

>174_bases
ATGGCAGTACCTTTTAGAAGAACTTCAAAAGCCAAAAAGCGTAAGCGTCGTACACACGTTAAACTTCAACTTCCGGGCAT
GAACGAATGCTCGAATTGCGGCGAATACAGACTTTCCCATCACGTATGCCCAGAATGTGGACAATATGATGGCAAAGATG
TAGCAAACAGCTAA

Upstream 100 bases:

>100_bases
AGAAGACTAAACTCCCCGTGAAGCTGGAATATATTAAGGAATTTATTTTTCTTAGATTAACGATACAAGTACTTAGTTAT
CGTCAAGGAGGTGTAAGGAA

Downstream 100 bases:

>100_bases
TATTGCTAAAAACAAGTGACGTTTCACTTGTTGAAGACGAACCTCGAAAGACGCCATGGGTCTTTCGAGGTTTTTGTTTG
CGCACAAAAGTGCAAAAGAA

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCPECGQYDGKDVANS

Sequences:

>Translated_57_residues
MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCPECGQYDGKDVANS
>Mature_56_residues
AVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCPECGQYDGKDVANS

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL322_LISIN (P66208)

Other databases:

- EMBL:   AL596171
- PIR:   AG1701
- RefSeq:   NP_471487.1
- ProteinModelPortal:   P66208
- SMR:   P66208
- GeneID:   1130883
- GenomeReviews:   AL592022_GR
- KEGG:   lin:lin2153
- GenoList:   LIN2153
- HOGENOM:   HBG728381
- OMA:   MAKHPVP
- ProtClustDB:   PRK12286
- BioCyc:   LINN272626:LIN2153-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6520; Mature: 6388

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCPECGQYDGKDVANS
CCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCPECGQYDGKDVANS
CCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669