| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is frlB [H]
Identifier: 226224596
GI number: 226224596
Start: 2059929
End: 2060924
Strand: Reverse
Name: frlB [H]
Synonym: Lm4b_02010
Alternate gene names: 226224596
Gene position: 2060924-2059929 (Counterclockwise)
Preceding gene: 226224597
Following gene: 226224595
Centisome position: 70.76
GC content: 38.65
Gene sequence:
>996_bases GTGCTAAAATTTGATGAACAAAAAGTGAGAGAAAACATGGAAGGAGCGCTAAAATTACGCCCGCAAATTAATGAAGTAGT TGACCAAATACATGACCGCGGCTTTAGTAATATTTGCTGGCTAGGAATTGGCGGTACATACGCGTCCGCCATGCAAGCAG TGGTGCATATGAAAGAAAAAACGGCATTAGAAACTTTTTATGAAAATGCTGCTGTGTTTCTAACGACAGGCAATAAACGT GTTACTAAAGATACCCTTGTAGTCATTTCATCGGTAACTGGAAGTACGCAAGAAGTGGTAGATGCTGTGAAAAAATGTAA TGAAATTGGCGCAACGGTATTTGGGTTTATTGATAAAGCAGAAGCGGAACTTGCGACTTTAGTAGATCACTTAATCTCCT ATCCGTTAAATGAACAATTAAAATTCTTCATGGTAGCAGATCGTTTTATGTATTTAGCTGGCGAATTTGAAGATTACGAT GCGTTCTATCAAGAAATGGATCAACATTTTGCAAAAGGGATTGTCGAAGTAGAAAAAGCAGCGGATAAATTTGGTCAAGA ATTTGCGCTAAAACATCATCAAGACGACATTCATTATTTCGTTGGTGCTGGGAACCAGTGGGGTGCGACCTATTCTTACG CAATGTGTTATTGGGAAGAGCAACACTGGATTAAAACAAAATCAATTGAGTCTCACGAGTTTTTCCATGGCATGTTTGAA ATTGTAGAACGCGATACACCAGTTACCATTTATGTGACAGAAGATAGCCAGCGTTCTTTAAGCGAGCGAGTAGTTAATTT CATTCCGCAAATCTGTGCCAATTATACAGTCATTGATGCAAAAGATTACGATATGCCGGGTATTTCCGCTAAATTCAGAG GGGCGTTATCACCATTTATTATCCACGCAGTAAATAATCGCATTGACGTACACGTGGAAAAAATTAACTGTCACCCAATG GAAATCAGAAGATATTATCGTCAGTTAGACTATTAA
Upstream 100 bases:
>100_bases ATTTCCAAGAAAAAAGGAATTAATTTAGAAGTATCCGCTTTTCCGGAGTTTGACCAAATAACGAAATCCAAAATTTAATC AAAGAAAGTAGGAATGAATA
Downstream 100 bases:
>100_bases AAAGGCGGTTTGAAAAATGAAAGCAATTTTTGTTTGTACTCATGGAAATGCCGCAAAAGAACTCATTCAATCTGCAGAAA TGATTTGCGGTAAACAAGAA
Product: opine catabolism protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MLKFDEQKVRENMEGALKLRPQINEVVDQIHDRGFSNICWLGIGGTYASAMQAVVHMKEKTALETFYENAAVFLTTGNKR VTKDTLVVISSVTGSTQEVVDAVKKCNEIGATVFGFIDKAEAELATLVDHLISYPLNEQLKFFMVADRFMYLAGEFEDYD AFYQEMDQHFAKGIVEVEKAADKFGQEFALKHHQDDIHYFVGAGNQWGATYSYAMCYWEEQHWIKTKSIESHEFFHGMFE IVERDTPVTIYVTEDSQRSLSERVVNFIPQICANYTVIDAKDYDMPGISAKFRGALSPFIIHAVNNRIDVHVEKINCHPM EIRRYYRQLDY
Sequences:
>Translated_331_residues MLKFDEQKVRENMEGALKLRPQINEVVDQIHDRGFSNICWLGIGGTYASAMQAVVHMKEKTALETFYENAAVFLTTGNKR VTKDTLVVISSVTGSTQEVVDAVKKCNEIGATVFGFIDKAEAELATLVDHLISYPLNEQLKFFMVADRFMYLAGEFEDYD AFYQEMDQHFAKGIVEVEKAADKFGQEFALKHHQDDIHYFVGAGNQWGATYSYAMCYWEEQHWIKTKSIESHEFFHGMFE IVERDTPVTIYVTEDSQRSLSERVVNFIPQICANYTVIDAKDYDMPGISAKFRGALSPFIIHAVNNRIDVHVEKINCHPM EIRRYYRQLDY >Mature_331_residues MLKFDEQKVRENMEGALKLRPQINEVVDQIHDRGFSNICWLGIGGTYASAMQAVVHMKEKTALETFYENAAVFLTTGNKR VTKDTLVVISSVTGSTQEVVDAVKKCNEIGATVFGFIDKAEAELATLVDHLISYPLNEQLKFFMVADRFMYLAGEFEDYD AFYQEMDQHFAKGIVEVEKAADKFGQEFALKHHQDDIHYFVGAGNQWGATYSYAMCYWEEQHWIKTKSIESHEFFHGMFE IVERDTPVTIYVTEDSQRSLSERVVNFIPQICANYTVIDAKDYDMPGISAKFRGALSPFIIHAVNNRIDVHVEKINCHPM EIRRYYRQLDY
Specific function: Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid [H]
COG id: COG2222
COG function: function code M; Predicted phosphosugar isomerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Escherichia coli, GI87082251, Length=316, Percent_Identity=23.1012658227848, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001347 [H]
Pfam domain/function: PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 38104; Mature: 38104
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKFDEQKVRENMEGALKLRPQINEVVDQIHDRGFSNICWLGIGGTYASAMQAVVHMKEK CCCCCHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH TALETFYENAAVFLTTGNKRVTKDTLVVISSVTGSTQEVVDAVKKCNEIGATVFGFIDKA HHHHHHHCCCEEEEEECCCEECHHHEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHH EAELATLVDHLISYPLNEQLKFFMVADRFMYLAGEFEDYDAFYQEMDQHFAKGIVEVEKA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ADKFGQEFALKHHQDDIHYFVGAGNQWGATYSYAMCYWEEQHWIKTKSIESHEFFHGMFE HHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHH IVERDTPVTIYVTEDSQRSLSERVVNFIPQICANYTVIDAKDYDMPGISAKFRGALSPFI HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHCCCCHHH IHAVNNRIDVHVEKINCHPMEIRRYYRQLDY HHHHCCEEEEEEEEECCCHHHHHHHHHHCCC >Mature Secondary Structure MLKFDEQKVRENMEGALKLRPQINEVVDQIHDRGFSNICWLGIGGTYASAMQAVVHMKEK CCCCCHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH TALETFYENAAVFLTTGNKRVTKDTLVVISSVTGSTQEVVDAVKKCNEIGATVFGFIDKA HHHHHHHCCCEEEEEECCCEECHHHEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHH EAELATLVDHLISYPLNEQLKFFMVADRFMYLAGEFEDYDAFYQEMDQHFAKGIVEVEKA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ADKFGQEFALKHHQDDIHYFVGAGNQWGATYSYAMCYWEEQHWIKTKSIESHEFFHGMFE HHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHH IVERDTPVTIYVTEDSQRSLSERVVNFIPQICANYTVIDAKDYDMPGISAKFRGALSPFI HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHCCCCHHH IHAVNNRIDVHVEKINCHPMEIRRYYRQLDY HHHHCCEEEEEEEEECCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]