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The map label for this gene is csoR [H]

Identifier: 226224457

GI number: 226224457

Start: 1917282

End: 1917575

Strand: Reverse

Name: csoR [H]

Synonym: Lm4b_01870

Alternate gene names: 226224457

Gene position: 1917575-1917282 (Counterclockwise)

Preceding gene: 226224458

Following gene: 226224456

Centisome position: 65.84

GC content: 38.44

Gene sequence:

>294_bases
ATGAAACACGATCAACCAATTGTTCCACGCAAAGAAGATGAAACGAAATTACTTCAAAATCGTTTGCGACGTATCGAAGG
CCAAATCCGCGGTATCGCTCAAATGGTCGAGGATGATAGATATTGTACAGACATTTTAGTTCAAATTTCAGCAGCGAATA
AAGCGCTCAAAAATGTTGGTTTACAAGTACTAGAACATCATACAGCACACTGTGTTGTAGATGCAGCAAAAAATGGGGAA
GATGACGTAATGGAGGACTTACTTAAAGCAATACGTCAATTTTCGAAAACCTAA

Upstream 100 bases:

>100_bases
CATTTGTTTATGGCTTTTTTTTGTTCTCAGAAATTAAATGGTTGCATAAAATACCTATAGGGGGTATACTGTTAATTGTA
GAAACAAAGGAGGAGAAAAA

Downstream 100 bases:

>100_bases
GGGGGGTATATACGATGAGTGATAAATATGTAAGACAAGATTTAAACATTTTTGGAATGACTTGTGCGGCCTGTTCCACG
AGAATTGAAAAATCGTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKHDQPIVPRKEDETKLLQNRLRRIEGQIRGIAQMVEDDRYCTDILVQISAANKALKNVGLQVLEHHTAHCVVDAAKNGE
DDVMEDLLKAIRQFSKT

Sequences:

>Translated_97_residues
MKHDQPIVPRKEDETKLLQNRLRRIEGQIRGIAQMVEDDRYCTDILVQISAANKALKNVGLQVLEHHTAHCVVDAAKNGE
DDVMEDLLKAIRQFSKT
>Mature_97_residues
MKHDQPIVPRKEDETKLLQNRLRRIEGQIRGIAQMVEDDRYCTDILVQISAANKALKNVGLQVLEHHTAHCVVDAAKNGE
DDVMEDLLKAIRQFSKT

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 11062; Mature: 11062

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHDQPIVPRKEDETKLLQNRLRRIEGQIRGIAQMVEDDRYCTDILVQISAANKALKNVG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LQVLEHHTAHCVVDAAKNGEDDVMEDLLKAIRQFSKT
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHDQPIVPRKEDETKLLQNRLRRIEGQIRGIAQMVEDDRYCTDILVQISAANKALKNVG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LQVLEHHTAHCVVDAAKNGEDDVMEDLLKAIRQFSKT
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]