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The map label for this gene is ypoP [H]

Identifier: 226224453

GI number: 226224453

Start: 1912737

End: 1913153

Strand: Reverse

Name: ypoP [H]

Synonym: Lm4b_01866

Alternate gene names: 226224453

Gene position: 1913153-1912737 (Counterclockwise)

Preceding gene: 226224454

Following gene: 226224452

Centisome position: 65.68

GC content: 35.49

Gene sequence:

>417_bases
ATGGAAACATACTTAGAAATTGAAACATTGATTAAGCGGATTTTTAATAGTTTTCGTCATGAAGTAGAGGCAGTACTCGA
CAAAAGGTTAAGTGGTAGCGAGTATCGGGTCTTGAGCTTGATTTCAAGTGGACTTACGAAAACATCAGAATTAGCTAAAA
CGCTTGATGTTTCAGCCAGTCACATCACAGCCATTACGGATACTTTAGTCGAAGAAAAGTTTATTACACGACATCGTTCA
GAAGTAGACCGCCGAATTATTGAACTGAAATTAACCCCAAATGCCGAGGAATTTGTCAAAGAAATTGATAAAAAGAAAAA
AGAAATGATTGTAAAACGTTTTGCTGTTTTTTCTGAGTATGAACAAGCAGAATTCCGCAAACTGCTCAAAAAATTAGCAG
ACGGATCAATTAAATAA

Upstream 100 bases:

>100_bases
AACACAAAAACATCTAAAAGAAACAGATCCACAACTACAAAAAGCAAAAGCCTTGGTGAAGTAAACGTACGACTTTTTTG
AAAAACTGGAGGTAGCGAAA

Downstream 100 bases:

>100_bases
TAATAGTGAAAATCCTGTAGTTTAATCGACTACGGGATTTTTTTGAACATTTTACTTTACAAGAAAAAGATTCTCCGTTA
TACTTTGAACTAAAGTTGCT

Product: transcriptional regulator (MarR family)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
METYLEIETLIKRIFNSFRHEVEAVLDKRLSGSEYRVLSLISSGLTKTSELAKTLDVSASHITAITDTLVEEKFITRHRS
EVDRRIIELKLTPNAEEFVKEIDKKKKEMIVKRFAVFSEYEQAEFRKLLKKLADGSIK

Sequences:

>Translated_138_residues
METYLEIETLIKRIFNSFRHEVEAVLDKRLSGSEYRVLSLISSGLTKTSELAKTLDVSASHITAITDTLVEEKFITRHRS
EVDRRIIELKLTPNAEEFVKEIDKKKKEMIVKRFAVFSEYEQAEFRKLLKKLADGSIK
>Mature_138_residues
METYLEIETLIKRIFNSFRHEVEAVLDKRLSGSEYRVLSLISSGLTKTSELAKTLDVSASHITAITDTLVEEKFITRHRS
EVDRRIIELKLTPNAEEFVKEIDKKKKEMIVKRFAVFSEYEQAEFRKLLKKLADGSIK

Specific function: Negative Regulator Of The Multidrug Operon Emrab. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16036; Mature: 16036

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METYLEIETLIKRIFNSFRHEVEAVLDKRLSGSEYRVLSLISSGLTKTSELAKTLDVSAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHH
HITAITDTLVEEKFITRHRSEVDRRIIELKLTPNAEEFVKEIDKKKKEMIVKRFAVFSEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAEFRKLLKKLADGSIK
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
METYLEIETLIKRIFNSFRHEVEAVLDKRLSGSEYRVLSLISSGLTKTSELAKTLDVSAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHH
HITAITDTLVEEKFITRHRSEVDRRIIELKLTPNAEEFVKEIDKKKKEMIVKRFAVFSEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAEFRKLLKKLADGSIK
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]