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The map label for this gene is fapR [H]

Identifier: 226224413

GI number: 226224413

Start: 1870350

End: 1870919

Strand: Reverse

Name: fapR [H]

Synonym: Lm4b_01826

Alternate gene names: 226224413

Gene position: 1870919-1870350 (Counterclockwise)

Preceding gene: 226224414

Following gene: 226224412

Centisome position: 64.23

GC content: 39.47

Gene sequence:

>570_bases
ATGAAAAAATATTCTAAAAAGGATCGTCAAATGAAACTTCAAGTTGCGATTGAAGAAAATCCTTTCATAACAGATGAGCA
GCTTGCAGAAAAATTTGGGGTCAGTGTGCAAACTATTCGTCTAGATAGAGTAGCACTTTCCATCCCCGAACTCAGAGAGC
GAATCAAACATGTTGCGAGTGTCAATTATGCCGATGCAGTAAAAAGCCTTCCCATCGATGAAGTGATTGGTGAAATTATT
GATATTCAACTTAGCAAGAGCGCTATTTCGATTTTTGATGTGCGTAGTGAGCATGTTTTTAAACGAAATAAAATCGCTCG
TGGGCATCATTTGTTTGCCCAAGCTAATTCCTTAGCAACCGCCGTCATCCCAAATGAAATAGCTCTAACAACACAAGCAA
CCGTTCGCTTTGTTCGTTCTGTAAACGAAGGAGAACGCATCATCGCAAAAGCAAAAGTACGTCCGGCAACAGACAACAGA
GCTATTACAATCGTAGACGTGAAAAGCTATGTTGGAGATGAAATTGTACTTAAAGGCAAATTTGAAATGTATCACGCAAC
GCAAAAATGA

Upstream 100 bases:

>100_bases
AGTTCTGAATGTTATCCTACAGAGGTAACTTCCTTTTTTTACCTACTGTTTAGTAGCTGGTATTAATACCTTTCACAAAA
AAAGAGATGAGGATACGTGC

Downstream 100 bases:

>100_bases
AAATAAAGGACTGACGTATAATGAAAATTGCTGTAGATGCGATGGGTGGAGATCATGCACCAAAAGAAATTGTTTTAGGT
GTGATGAAAGCTGTGGCCCA

Product: fatty acid biosynthesis transcriptional regulator

Products: NA

Alternate protein names: Fatty acid and phospholipid biosynthesis regulator [H]

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKKYSKKDRQMKLQVAIEENPFITDEQLAEKFGVSVQTIRLDRVALSIPELRERIKHVASVNYADAVKSLPIDEVIGEII
DIQLSKSAISIFDVRSEHVFKRNKIARGHHLFAQANSLATAVIPNEIALTTQATVRFVRSVNEGERIIAKAKVRPATDNR
AITIVDVKSYVGDEIVLKGKFEMYHATQK

Sequences:

>Translated_189_residues
MKKYSKKDRQMKLQVAIEENPFITDEQLAEKFGVSVQTIRLDRVALSIPELRERIKHVASVNYADAVKSLPIDEVIGEII
DIQLSKSAISIFDVRSEHVFKRNKIARGHHLFAQANSLATAVIPNEIALTTQATVRFVRSVNEGERIIAKAKVRPATDNR
AITIVDVKSYVGDEIVLKGKFEMYHATQK
>Mature_189_residues
MKKYSKKDRQMKLQVAIEENPFITDEQLAEKFGVSVQTIRLDRVALSIPELRERIKHVASVNYADAVKSLPIDEVIGEII
DIQLSKSAISIFDVRSEHVFKRNKIARGHHLFAQANSLATAVIPNEIALTTQATVRFVRSVNEGERIIAKAKVRPATDNR
AITIVDVKSYVGDEIVLKGKFEMYHATQK

Specific function: Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism [H]

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fapR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017275
- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21297; Mature: 21297

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYSKKDRQMKLQVAIEENPFITDEQLAEKFGVSVQTIRLDRVALSIPELRERIKHVAS
CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCEEEEEEEHHHHCCCHHHHHHHHHHHC
VNYADAVKSLPIDEVIGEIIDIQLSKSAISIFDVRSEHVFKRNKIARGHHLFAQANSLAT
CCHHHHHHCCCHHHHHHHHHEEEECCCEEEEEECCHHHHHHHCCCCCCHHHEECCCCEEE
AVIPNEIALTTQATVRFVRSVNEGERIIAKAKVRPATDNRAITIVDVKSYVGDEIVLKGK
EECCCCEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEEHHHCCCEEEEECC
FEMYHATQK
EEEEECCCC
>Mature Secondary Structure
MKKYSKKDRQMKLQVAIEENPFITDEQLAEKFGVSVQTIRLDRVALSIPELRERIKHVAS
CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCEEEEEEEHHHHCCCHHHHHHHHHHHC
VNYADAVKSLPIDEVIGEIIDIQLSKSAISIFDVRSEHVFKRNKIARGHHLFAQANSLAT
CCHHHHHHCCCHHHHHHHHHEEEECCCEEEEEECCHHHHHHHCCCCCCHHHEECCCCEEE
AVIPNEIALTTQATVRFVRSVNEGERIIAKAKVRPATDNRAITIVDVKSYVGDEIVLKGK
EECCCCEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEEHHHCCCEEEEECC
FEMYHATQK
EEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]