| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224384
Identifier: 226224384
GI number: 226224384
Start: 1843680
End: 1844210
Strand: Reverse
Name: 226224384
Synonym: Lm4b_01797
Alternate gene names: NA
Gene position: 1844210-1843680 (Counterclockwise)
Preceding gene: 226224386
Following gene: 226224383
Centisome position: 63.32
GC content: 38.42
Gene sequence:
>531_bases ATGGGGAATTATGTAGTGTTATTAAGAGCAGTAAATGTTGCTGGAAAGAATAAAGTAAATATGAAAAATCTACAAGCTGC TTTGCAAGAAGTAGGTTTCCAAAATGTCATTACTTATATCCAAAGCGGCAACCTCGTTCTAAGCTCCATGTTACAAACGG AACTAGAAGTAGCGACAAAAATAACCGAGGTAATGAAAGCAACGTTCGATTTAACTATTGATGTATTCGTATTTTCGGAA CAAAATTATAGCCAAATCATCGCAAACAATCCATTTCCACCAGAAACAATTGGCGAGGAGGAACGCTGGATGGCCGCTTT CTATAATGAAAATATCGCTATTGCGAGACAAAAAAACGAGCAAGCCGAAGTAATCGCGATTGGTCGCGTTCTTTATATCC ACATTTTCTCCAACCAAATCCACACCTTAAAATTACCAGTTTTCCTTGGCGAATATAAAAAGACCATAACAACAACGCGC AATTGGCGAACAACCCTCCAATTACAAACACTACTCGACAGTCAGGAATAG
Upstream 100 bases:
>100_bases CAAGAAATTAATTTCACCTAAAAAACCTCCCATCGCTAATAGCCTTATTATAACGTAAGTCACATGCTATAATGTAGTTA AACGATTGGGAGGGAGATAG
Downstream 100 bases:
>100_bases AATTTTTCGAAAATCAAGTTTATAATGAAAAAGAATCAATTTAAGGGAGTGGTCGGAATGAAAGAAGAACTATTAAAACG ATTTACGAAATATGTAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MGNYVVLLRAVNVAGKNKVNMKNLQAALQEVGFQNVITYIQSGNLVLSSMLQTELEVATKITEVMKATFDLTIDVFVFSE QNYSQIIANNPFPPETIGEEERWMAAFYNENIAIARQKNEQAEVIAIGRVLYIHIFSNQIHTLKLPVFLGEYKKTITTTR NWRTTLQLQTLLDSQE
Sequences:
>Translated_176_residues MGNYVVLLRAVNVAGKNKVNMKNLQAALQEVGFQNVITYIQSGNLVLSSMLQTELEVATKITEVMKATFDLTIDVFVFSE QNYSQIIANNPFPPETIGEEERWMAAFYNENIAIARQKNEQAEVIAIGRVLYIHIFSNQIHTLKLPVFLGEYKKTITTTR NWRTTLQLQTLLDSQE >Mature_175_residues GNYVVLLRAVNVAGKNKVNMKNLQAALQEVGFQNVITYIQSGNLVLSSMLQTELEVATKITEVMKATFDLTIDVFVFSEQ NYSQIIANNPFPPETIGEEERWMAAFYNENIAIARQKNEQAEVIAIGRVLYIHIFSNQIHTLKLPVFLGEYKKTITTTRN WRTTLQLQTLLDSQE
Specific function: Unknown
COG id: COG3797
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20044; Mature: 19913
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNYVVLLRAVNVAGKNKVNMKNLQAALQEVGFQNVITYIQSGNLVLSSMLQTELEVATK CCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH ITEVMKATFDLTIDVFVFSEQNYSQIIANNPFPPETIGEEERWMAAFYNENIAIARQKNE HHHHHHHHHCEEEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCC QAEVIAIGRVLYIHIFSNQIHTLKLPVFLGEYKKTITTTRNWRTTLQLQTLLDSQE CEEEEEECEEEEEEEECCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure GNYVVLLRAVNVAGKNKVNMKNLQAALQEVGFQNVITYIQSGNLVLSSMLQTELEVATK CCEEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH ITEVMKATFDLTIDVFVFSEQNYSQIIANNPFPPETIGEEERWMAAFYNENIAIARQKNE HHHHHHHHHCEEEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCC QAEVIAIGRVLYIHIFSNQIHTLKLPVFLGEYKKTITTTRNWRTTLQLQTLLDSQE CEEEEEECEEEEEEEECCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA