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The map label for this gene is yerC [H]

Identifier: 226224366

GI number: 226224366

Start: 1821230

End: 1821526

Strand: Reverse

Name: yerC [H]

Synonym: Lm4b_01777

Alternate gene names: 226224366

Gene position: 1821526-1821230 (Counterclockwise)

Preceding gene: 226224367

Following gene: 226224365

Centisome position: 62.54

GC content: 35.02

Gene sequence:

>297_bases
ATGCAAATAGAGAAGTTGCGTGGACAAGGATTGGATGAATTCTTCCAAGGGATTTTAACGCTCGAGAATTTAGAAGAATG
TTATGCTTTTTTTGATGATGTTTGTACAGTGAATGAAATACAGTCCATGGCTCAACGTTTCCAAGTAGCAAAAATGCTTC
ATGATGGAAAAACATATAATGTGATTGAATCTGAAACTGGGGCAAGTACAGCAACTATTTCACGTGTAAAACGTTCACTT
CATTATGGTAATGATATGTATGATGTAGTATTTTCAAGAATGACGAAGCCAGAATAA

Upstream 100 bases:

>100_bases
ACTTTTTTTGTTCATTAAGTGAAGAGAAACGTTTGTGTTTTACGCGTTGGTACGTTAAAATATGAAAGTAGGATATATGA
GATTATTTGGAGGTAAAGAT

Downstream 100 bases:

>100_bases
GATTGTAGGGATTATATTGAAAAAGTTTAATAGTAAAACCTATCAGATTGTCATCATCTCTATTCTTGCGCTTGCAGTTA
TTTATTTTGTGATTAATATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MQIEKLRGQGLDEFFQGILTLENLEECYAFFDDVCTVNEIQSMAQRFQVAKMLHDGKTYNVIESETGASTATISRVKRSL
HYGNDMYDVVFSRMTKPE

Sequences:

>Translated_98_residues
MQIEKLRGQGLDEFFQGILTLENLEECYAFFDDVCTVNEIQSMAQRFQVAKMLHDGKTYNVIESETGASTATISRVKRSL
HYGNDMYDVVFSRMTKPE
>Mature_98_residues
MQIEKLRGQGLDEFFQGILTLENLEECYAFFDDVCTVNEIQSMAQRFQVAKMLHDGKTYNVIESETGASTATISRVKRSL
HYGNDMYDVVFSRMTKPE

Specific function: Unknown

COG id: COG4496

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000831
- InterPro:   IPR010921
- InterPro:   IPR013368 [H]

Pfam domain/function: PF01371 Trp_repressor [H]

EC number: NA

Molecular weight: Translated: 11267; Mature: 11267

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIEKLRGQGLDEFFQGILTLENLEECYAFFDDVCTVNEIQSMAQRFQVAKMLHDGKTYN
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
VIESETGASTATISRVKRSLHYGNDMYDVVFSRMTKPE
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MQIEKLRGQGLDEFFQGILTLENLEECYAFFDDVCTVNEIQSMAQRFQVAKMLHDGKTYN
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
VIESETGASTATISRVKRSLHYGNDMYDVVFSRMTKPE
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969499; 9701819; 9384377 [H]