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The map label for this gene is pcrB

Identifier: 226224363

GI number: 226224363

Start: 1818677

End: 1819354

Strand: Reverse

Name: pcrB

Synonym: Lm4b_01774

Alternate gene names: 226224363

Gene position: 1819354-1818677 (Counterclockwise)

Preceding gene: 226224365

Following gene: 226224362

Centisome position: 62.46

GC content: 37.76

Gene sequence:

>678_bases
ATGAAGCATTTATTCAAGTTAGACCCAGCAAAGAATTTACCAATGAATGATCTAACGAAGCTCGTCCATTCTGGAACCAA
TGGATTTATTATTGGTGGGACGGATAATGTACAAATCGAAGCAGTCCAAAAGCTCTACGAATTATTAGGTGAAACGGACT
TGCCGATTTTCCTTGAAATAAGCAACGAATCCATGATTTTACCTGAAGCAGACCATTTTTTAATTCCAGTAGTGTTGAAT
ACAGAAAATAGTAAATGGACACACGGTTTACACCAGGAGTTAATCAAAGAAATGGGAGCATTTATTCCTTGGAAACGAGT
CACAGCAGAAGGCTACGTTATTTTAAATAAAGATGCAAAAGTGGCTCATTTAACAGAAGCGAAGACCGATTTAACGGACG
AAGACATCGTTGCCTATGCGCGGTTAGCAGAGAATATATTTCATCTGCCCATTTTTTATGTCGAATATAGCGGCATGTAC
GGAGATCCAGAGGTTGTAAGAAAAGCAAGCGCCGCATTAAGTAATACAAAATTTTGGTATGGGGGCGGAATACGTTCAAA
AGAACAAGCTGCTGAAATGGTAAAATATGCGGATACGATTATTGTTGGCAATATTATTTATGAAGATTTAGAAAAAGCAC
TAGAAACCGCAACTATTTTTAGGAAGAAAACGGTTTGA

Upstream 100 bases:

>100_bases
AAAAAGCTTAAAAAAAGTTAAAATTTTTGGTCGTAAGGGTGCGATGAAATGTAACTAATGCTATAATAAGATATCCCATT
ATAGAGACTTGGAGGAGCAA

Downstream 100 bases:

>100_bases
TTATAAAGTGTAGTATGATAAAATAAGAACAAATGTTTGTATGGTGGTGTATAGGAGAATGCAATTGAATGCAAAAGAAT
TAGTGGACGGATTGAATCCG

Product: geranylgeranylglyceryl phosphate synthase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKHLFKLDPAKNLPMNDLTKLVHSGTNGFIIGGTDNVQIEAVQKLYELLGETDLPIFLEISNESMILPEADHFLIPVVLN
TENSKWTHGLHQELIKEMGAFIPWKRVTAEGYVILNKDAKVAHLTEAKTDLTDEDIVAYARLAENIFHLPIFYVEYSGMY
GDPEVVRKASAALSNTKFWYGGGIRSKEQAAEMVKYADTIIVGNIIYEDLEKALETATIFRKKTV

Sequences:

>Translated_225_residues
MKHLFKLDPAKNLPMNDLTKLVHSGTNGFIIGGTDNVQIEAVQKLYELLGETDLPIFLEISNESMILPEADHFLIPVVLN
TENSKWTHGLHQELIKEMGAFIPWKRVTAEGYVILNKDAKVAHLTEAKTDLTDEDIVAYARLAENIFHLPIFYVEYSGMY
GDPEVVRKASAALSNTKFWYGGGIRSKEQAAEMVKYADTIIVGNIIYEDLEKALETATIFRKKTV
>Mature_225_residues
MKHLFKLDPAKNLPMNDLTKLVHSGTNGFIIGGTDNVQIEAVQKLYELLGETDLPIFLEISNESMILPEADHFLIPVVLN
TENSKWTHGLHQELIKEMGAFIPWKRVTAEGYVILNKDAKVAHLTEAKTDLTDEDIVAYARLAENIFHLPIFYVEYSGMY
GDPEVVRKASAALSNTKFWYGGGIRSKEQAAEMVKYADTIIVGNIIYEDLEKALETATIFRKKTV

Specific function: Probable prenyltransferase that may catalyze the transfer of a prenyl moiety to sn-glycerol-1-phosphate (G1P)

COG id: COG1646

COG function: function code R; Predicted phosphate-binding enzymes, TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GGGP synthase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PCRB_LISMC (C1KW59)

Other databases:

- EMBL:   FM242711
- RefSeq:   YP_002758470.1
- GeneID:   7704039
- GenomeReviews:   FM242711_GR
- KEGG:   lmc:Lm4b_01774
- OMA:   TGAHKEW
- ProtClustDB:   PRK04169
- HAMAP:   MF_00112
- InterPro:   IPR008205
- Gene3D:   G3DSA:3.20.20.390
- TIGRFAMs:   TIGR01768

Pfam domain/function: PF01884 PcrB

EC number: NA

Molecular weight: Translated: 25315; Mature: 25315

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: BINDING 6-6 BINDING 158-158 BINDING 183-183 BINDING 204-204

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLFKLDPAKNLPMNDLTKLVHSGTNGFIIGGTDNVQIEAVQKLYELLGETDLPIFLEI
CCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEE
SNESMILPEADHFLIPVVLNTENSKWTHGLHQELIKEMGAFIPWKRVTAEGYVILNKDAK
CCCEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCCCC
VAHLTEAKTDLTDEDIVAYARLAENIFHLPIFYVEYSGMYGDPEVVRKASAALSNTKFWY
EEEEHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEE
GGGIRSKEQAAEMVKYADTIIVGNIIYEDLEKALETATIFRKKTV
CCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKHLFKLDPAKNLPMNDLTKLVHSGTNGFIIGGTDNVQIEAVQKLYELLGETDLPIFLEI
CCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEE
SNESMILPEADHFLIPVVLNTENSKWTHGLHQELIKEMGAFIPWKRVTAEGYVILNKDAK
CCCEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCCCC
VAHLTEAKTDLTDEDIVAYARLAENIFHLPIFYVEYSGMYGDPEVVRKASAALSNTKFWY
EEEEHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEE
GGGIRSKEQAAEMVKYADTIIVGNIIYEDLEKALETATIFRKKTV
CCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA