| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is bglX [H]
Identifier: 226224332
GI number: 226224332
Start: 1779510
End: 1781681
Strand: Reverse
Name: bglX [H]
Synonym: Lm4b_01743
Alternate gene names: 226224332
Gene position: 1781681-1779510 (Counterclockwise)
Preceding gene: 226224336
Following gene: 226224331
Centisome position: 61.17
GC content: 41.3
Gene sequence:
>2172_bases ATGAAACAAGAAAAAGTACAGGATTTAGTCAATCAAATGACGTTAGATGAAAAAATCGCTCAATGTCTTCAACTTTCCCC TTTTCTTTTTAAAGGTACAAACAAAAATGCAGAACTAACAGGGCCGCTTCTTCAAGAAATGAAATTAACGGATGCGCATA CGGAAAATGCGGGTTCGGTGCTTGGATCAAGTTCGGCGCTTGATATGATTGGTATTCAGGAAGCTTATTTAAAAACGAAT CGATTAGGAATTCCGCTTGTTTTTATGGCGGATGTCATACACGGGTATAAAACGGTATTTCCTATTCCGCTTGCACTTGG TTGTTCTTTTGACCGGGAGACTGTTCGAGTGATGGCAGAAGTTTCGGCGCTCGAAGCAACGGCAGATGGGCATCATGTCA CTTTTTCACCAATGCTTGATTTAGTACGGGACCCGCGGTGGGGACGTGTGATGGAATCAACTGGTGAGGATCCATTTTTA AATAGTGAACTTGGAAAGGCAATGGTAGATGGTTACCAAGGCGATGCGAGTAAACTACATGAAAACTTGGAGCAAATGGC GGCATGTGTCAAACATTTTGCGGCATACGGGGCTGCGGAGGCTGGGCTGGAATACAACACAGTTAATATGTCTACGCGCG AACTTTATCAAAATTATTTACCAGCTTATAATGCCGCAATACAAGCTGGAGCTAAATTAGTCATGACTGCTTTTAACGTG GTAGACGGGATTCCAGCAACAATGAACAAATGGCTTAACCGAGATGTTCTACGAGACGAAATGGGTTTTGACGGTGTACT TATTTCTGACTGGGGCGCTGTTGCCGAAGTAATTAATCACGGAACAGCCAGAAATCCTAAAGAAGCCGCACAGTTTTCGA TGGAAGCAGGCGTTGATTTAGAAATGATGACGACTTGTTATATCCATGAATTAAAAGGTTTAATTGAAGAAGGCAAATTA TCCGAAAGCCTTTTAGATGAAGCAGTACTTCGGATGTTAACTTTAAAAAATGATTTAGGGCTATTTGAAGATCCCTATCG CGGATTAAAAAATAACGACCGCACAAAAGATATTTTAACCGATGATAGCCGCGGGAAAGCTCGGGCAGCAGGTATTGAAT CTGCTGTGTTATTAGAAAATAAAAACCGATTACTTCCACTGGCTAAAGAAGCAAAAATTGCCTTGGTTGGTCCACTTGCA ACGTCGCCTGATATTCTCGGTGGTTGGAATGTATACGGTGAAGAAAAAGATGGCATCAATGTTGAAACAGGTTTGCGTGA AGTATTTGAAACGGTCGAAGTCGTTTCAACGGAGTACACTGAATTGTCGGAAGAAGACAAAGTGGCAGTGAAAGCGGCAG TAGAGAACATGGATGTTGTCGTGCTTGCCCTAGGTGAAAAAAATGAATGGGGCGGGGAAGCAGGAAGTCTTGCTACTATA CGCTTGCCGGAAGCACAATATGAATTAGCGAAATTCGTCCAAACATTAGGAAAACCAGTTGTTATTACATTATTTAATGG TAGACCGCTCGAAGTGAAAGAGTTAGCAGAATCTAGTGATGCTCTTCTTGAATTATGGTTCCCAGGGACAGAAGCAGGCC GTGTCACTGCAGATTTATTAAGTGGTGCAAGTAATCCTTCGGGGAAATTATCCATGTCATTCCCGCAAACAACTGGTCAA ATTCCGGTTTATTATAATCATTTACGCACTGGACGACCACAAACACCGGAAAATAAAGGCGAACGCTATGTGTCGCATTA TCTTGATATTCCAAATGAACCATTTTATCCATTTGGTTACGGAAAAAGCTATAGCGAATTCGAGTTAAAAACAAGCAGTC TTCCGAAAGAACTAAATCTAGGTGAATCACTACATGTGGAAGTAACCATTAAAAATATTAGTGATATTGCTGGAAAAGAA GTAATCCAAGTTTATTTACAAGATGTGACAGCGAGCATTTCACGACCAGTCAAAGAATTAAAAGCTTTTGAAAAAGTAGC GCTTCAAGCTGGCGAAGAAAAAACAGTTAGATTTGAATTAACAAGCGAGGCATTTTCATTCTATAACCAGCAGCTTGAAA AAGTGCAGGAACCGGGACTTCACCGAGTTTTTGTTGGGACTAGTAGTGAAGATGTAGACGTTTTTGAAGTGGAAGTGGGT GGATATGTGTGA
Upstream 100 bases:
>100_bases CATGTGAATGTCGTTTTTGGTTGACTAAAGAAAAGAAAGCGCTTATACTGTTGTTATATTTGAATAGAAACGTTTCGAAA AAAGTGTTCAGGAGGTTCCT
Downstream 100 bases:
>100_bases CGATGTTAAAAGAAATTAAAAAAGCGGATTTATCAGCCGCATTTTATCCGAGCGGTGAGCTTGCTTGGTTAAAATGGAAA GATATTATGTTAAATCAAGT
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 723; Mature: 723
Protein sequence:
>723_residues MKQEKVQDLVNQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLLQEMKLTDAHTENAGSVLGSSSALDMIGIQEAYLKTN RLGIPLVFMADVIHGYKTVFPIPLALGCSFDRETVRVMAEVSALEATADGHHVTFSPMLDLVRDPRWGRVMESTGEDPFL NSELGKAMVDGYQGDASKLHENLEQMAACVKHFAAYGAAEAGLEYNTVNMSTRELYQNYLPAYNAAIQAGAKLVMTAFNV VDGIPATMNKWLNRDVLRDEMGFDGVLISDWGAVAEVINHGTARNPKEAAQFSMEAGVDLEMMTTCYIHELKGLIEEGKL SESLLDEAVLRMLTLKNDLGLFEDPYRGLKNNDRTKDILTDDSRGKARAAGIESAVLLENKNRLLPLAKEAKIALVGPLA TSPDILGGWNVYGEEKDGINVETGLREVFETVEVVSTEYTELSEEDKVAVKAAVENMDVVVLALGEKNEWGGEAGSLATI RLPEAQYELAKFVQTLGKPVVITLFNGRPLEVKELAESSDALLELWFPGTEAGRVTADLLSGASNPSGKLSMSFPQTTGQ IPVYYNHLRTGRPQTPENKGERYVSHYLDIPNEPFYPFGYGKSYSEFELKTSSLPKELNLGESLHVEVTIKNISDIAGKE VIQVYLQDVTASISRPVKELKAFEKVALQAGEEKTVRFELTSEAFSFYNQQLEKVQEPGLHRVFVGTSSEDVDVFEVEVG GYV
Sequences:
>Translated_723_residues MKQEKVQDLVNQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLLQEMKLTDAHTENAGSVLGSSSALDMIGIQEAYLKTN RLGIPLVFMADVIHGYKTVFPIPLALGCSFDRETVRVMAEVSALEATADGHHVTFSPMLDLVRDPRWGRVMESTGEDPFL NSELGKAMVDGYQGDASKLHENLEQMAACVKHFAAYGAAEAGLEYNTVNMSTRELYQNYLPAYNAAIQAGAKLVMTAFNV VDGIPATMNKWLNRDVLRDEMGFDGVLISDWGAVAEVINHGTARNPKEAAQFSMEAGVDLEMMTTCYIHELKGLIEEGKL SESLLDEAVLRMLTLKNDLGLFEDPYRGLKNNDRTKDILTDDSRGKARAAGIESAVLLENKNRLLPLAKEAKIALVGPLA TSPDILGGWNVYGEEKDGINVETGLREVFETVEVVSTEYTELSEEDKVAVKAAVENMDVVVLALGEKNEWGGEAGSLATI RLPEAQYELAKFVQTLGKPVVITLFNGRPLEVKELAESSDALLELWFPGTEAGRVTADLLSGASNPSGKLSMSFPQTTGQ IPVYYNHLRTGRPQTPENKGERYVSHYLDIPNEPFYPFGYGKSYSEFELKTSSLPKELNLGESLHVEVTIKNISDIAGKE VIQVYLQDVTASISRPVKELKAFEKVALQAGEEKTVRFELTSEAFSFYNQQLEKVQEPGLHRVFVGTSSEDVDVFEVEVG GYV >Mature_723_residues MKQEKVQDLVNQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLLQEMKLTDAHTENAGSVLGSSSALDMIGIQEAYLKTN RLGIPLVFMADVIHGYKTVFPIPLALGCSFDRETVRVMAEVSALEATADGHHVTFSPMLDLVRDPRWGRVMESTGEDPFL NSELGKAMVDGYQGDASKLHENLEQMAACVKHFAAYGAAEAGLEYNTVNMSTRELYQNYLPAYNAAIQAGAKLVMTAFNV VDGIPATMNKWLNRDVLRDEMGFDGVLISDWGAVAEVINHGTARNPKEAAQFSMEAGVDLEMMTTCYIHELKGLIEEGKL SESLLDEAVLRMLTLKNDLGLFEDPYRGLKNNDRTKDILTDDSRGKARAAGIESAVLLENKNRLLPLAKEAKIALVGPLA TSPDILGGWNVYGEEKDGINVETGLREVFETVEVVSTEYTELSEEDKVAVKAAVENMDVVVLALGEKNEWGGEAGSLATI RLPEAQYELAKFVQTLGKPVVITLFNGRPLEVKELAESSDALLELWFPGTEAGRVTADLLSGASNPSGKLSMSFPQTTGQ IPVYYNHLRTGRPQTPENKGERYVSHYLDIPNEPFYPFGYGKSYSEFELKTSSLPKELNLGESLHVEVTIKNISDIAGKE VIQVYLQDVTASISRPVKELKAFEKVALQAGEEKTVRFELTSEAFSFYNQQLEKVQEPGLHRVFVGTSSEDVDVFEVEVG GYV
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=747, Percent_Identity=40.6961178045515, Blast_Score=542, Evalue=1e-155,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 79524; Mature: 79524
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQEKVQDLVNQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLLQEMKLTDAHTENAGSV CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHH LGSSSALDMIGIQEAYLKTNRLGIPLVFMADVIHGYKTVFPIPLALGCSFDRETVRVMAE CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCHHHHHHHHH VSALEATADGHHVTFSPMLDLVRDPRWGRVMESTGEDPFLNSELGKAMVDGYQGDASKLH HHHHHCCCCCCEEEHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHH ENLEQMAACVKHFAAYGAAEAGLEYNTVNMSTRELYQNYLPAYNAAIQAGAKLVMTAFNV HHHHHHHHHHHHHHHHCHHHCCCEEEEECCHHHHHHHHHCHHHHHHHHHCHHHHHHHHHH VDGIPATMNKWLNRDVLRDEMGFDGVLISDWGAVAEVINHGTARNPKEAAQFSMEAGVDL HCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCH EMMTTCYIHELKGLIEEGKLSESLLDEAVLRMLTLKNDLGLFEDPYRGLKNNDRTKDILT HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCC DDSRGKARAAGIESAVLLENKNRLLPLAKEAKIALVGPLATSPDILGGWNVYGEEKDGIN CCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC VETGLREVFETVEVVSTEYTELSEEDKVAVKAAVENMDVVVLALGEKNEWGGEAGSLATI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEE RLPEAQYELAKFVQTLGKPVVITLFNGRPLEVKELAESSDALLELWFPGTEAGRVTADLL ECCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHH SGASNPSGKLSMSFPQTTGQIPVYYNHLRTGRPQTPENKGERYVSHYLDIPNEPFYPFGY CCCCCCCCEEEEECCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC GKSYSEFELKTSSLPKELNLGESLHVEVTIKNISDIAGKEVIQVYLQDVTASISRPVKEL CCCCCCEEEEHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAFEKVALQAGEEKTVRFELTSEAFSFYNQQLEKVQEPGLHRVFVGTSSEDVDVFEVEVG HHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECC GYV CCC >Mature Secondary Structure MKQEKVQDLVNQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLLQEMKLTDAHTENAGSV CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHH LGSSSALDMIGIQEAYLKTNRLGIPLVFMADVIHGYKTVFPIPLALGCSFDRETVRVMAE CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCHHHHHHHHH VSALEATADGHHVTFSPMLDLVRDPRWGRVMESTGEDPFLNSELGKAMVDGYQGDASKLH HHHHHCCCCCCEEEHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHH ENLEQMAACVKHFAAYGAAEAGLEYNTVNMSTRELYQNYLPAYNAAIQAGAKLVMTAFNV HHHHHHHHHHHHHHHHCHHHCCCEEEEECCHHHHHHHHHCHHHHHHHHHCHHHHHHHHHH VDGIPATMNKWLNRDVLRDEMGFDGVLISDWGAVAEVINHGTARNPKEAAQFSMEAGVDL HCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCH EMMTTCYIHELKGLIEEGKLSESLLDEAVLRMLTLKNDLGLFEDPYRGLKNNDRTKDILT HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCC DDSRGKARAAGIESAVLLENKNRLLPLAKEAKIALVGPLATSPDILGGWNVYGEEKDGIN CCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC VETGLREVFETVEVVSTEYTELSEEDKVAVKAAVENMDVVVLALGEKNEWGGEAGSLATI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEE RLPEAQYELAKFVQTLGKPVVITLFNGRPLEVKELAESSDALLELWFPGTEAGRVTADLL ECCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHH SGASNPSGKLSMSFPQTTGQIPVYYNHLRTGRPQTPENKGERYVSHYLDIPNEPFYPFGY CCCCCCCCEEEEECCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC GKSYSEFELKTSSLPKELNLGESLHVEVTIKNISDIAGKEVIQVYLQDVTASISRPVKEL CCCCCCEEEEHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAFEKVALQAGEEKTVRFELTSEAFSFYNQQLEKVQEPGLHRVFVGTSSEDVDVFEVEVG HHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECC GYV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]