| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is cbiG
Identifier: 226223798
GI number: 226223798
Start: 1203479
End: 1204510
Strand: Direct
Name: cbiG
Synonym: Lm4b_01202
Alternate gene names: 226223798
Gene position: 1203479-1204510 (Clockwise)
Preceding gene: 226223797
Following gene: 226223799
Centisome position: 41.32
GC content: 41.38
Gene sequence:
>1032_bases ATGAATACAGATAAACTGGCGATTATTGCTGTCACAGAACGTGGTCGCGATTTAGCAATAACGTTAACAAAAACGGTAGC AGCAACGATTTTTGTACCAGGAAAGCATTGCAATGAGCAAACAAATTCTTTAACGCCGGATTTTGGAACAGCGATGCGCG AAATTTTCACAAAATATCAAGCATTGATTTGTATTATGGCGACTGGAATTGCGGTTCGAACGCTTGCTCCAGCGATAGAA GACAAGCTGTCTGATCCAGCAGTACTTGTCATGGATGAACATGGGAAATTTATTATCAGCTTGCTTTCAGGACATGTTGG CGGGGCAAATGAACTAACCGAACAAATCGCTATGATAACTGGTGGTGCGGCAGTAATTACAACCGCAACAGACCGCGCAA ATGTAGCTGCAATTGATAATATCGCCAAACAATTAAATGGTTATTTACCAGATTTTAAAGCGACAACAAAACGCATCAAT GGTTTACTTGCAGCAGGAAAAGAAGTTGGATTGTACATCGATGAGCCATTAGATATAGATACACGCGGTTTTACAATGGA AGAAGTTAGCCCGCAAGTTTACATTTCAACTAAATATAAACTACAAGTGGCGACACATGAACGCATCCAGCTGGTACCTA AGCAATTTATCCTCGGGGTCGGTTGCAGAAAAGGCGTTTCAGCGGAAACGATAGATGCAGCATTTACACATTTTTGTGAA CAAGAAAACATACACCCGCGGGCATTCCGTGAGATTCATAGTATTACTTTAAAAGCGGAAGAACCGGCAATTCTTCATTT AGCGGAGAAATGGCGTGTCCCATTTATTGTCCATCCAGCAGAAGAATTACAAACAGTTGCTGGAAAATATCCAACATCCG CTTTTGTTCAAAAAACTGTTCAAGTAGGAAATGTCGCCCTATCGTCAGCAGACATTGGTAGTAACGGAAACGTTGTTACA AGCCGATTTGCTGAAAATGGCGTGACTTTCGCAGCAGGGAAATTAACTAAAAATAGTGAGGTGGCAAAATGA
Upstream 100 bases:
>100_bases GTAACAGAAGCTGGAATTACGAAAACGGCGCTTATTATGGTCGGTGATTTCCTTGGAGAAGAGTTTTATTATTCTAAGCT ATACGACAAGGATTTCAAAC
Downstream 100 bases:
>100_bases TTTATGTAATCGGAATTGGCCCAGGAGATAAACGATTAATGACCGGTGAAGCACTGCAAGCAATAGAAGACGCGGAGGTG ATTGTTGGTTACGTAACGTA
Product: cobalamin biosynthesis protein CbiG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MNTDKLAIIAVTERGRDLAITLTKTVAATIFVPGKHCNEQTNSLTPDFGTAMREIFTKYQALICIMATGIAVRTLAPAIE DKLSDPAVLVMDEHGKFIISLLSGHVGGANELTEQIAMITGGAAVITTATDRANVAAIDNIAKQLNGYLPDFKATTKRIN GLLAAGKEVGLYIDEPLDIDTRGFTMEEVSPQVYISTKYKLQVATHERIQLVPKQFILGVGCRKGVSAETIDAAFTHFCE QENIHPRAFREIHSITLKAEEPAILHLAEKWRVPFIVHPAEELQTVAGKYPTSAFVQKTVQVGNVALSSADIGSNGNVVT SRFAENGVTFAAGKLTKNSEVAK
Sequences:
>Translated_343_residues MNTDKLAIIAVTERGRDLAITLTKTVAATIFVPGKHCNEQTNSLTPDFGTAMREIFTKYQALICIMATGIAVRTLAPAIE DKLSDPAVLVMDEHGKFIISLLSGHVGGANELTEQIAMITGGAAVITTATDRANVAAIDNIAKQLNGYLPDFKATTKRIN GLLAAGKEVGLYIDEPLDIDTRGFTMEEVSPQVYISTKYKLQVATHERIQLVPKQFILGVGCRKGVSAETIDAAFTHFCE QENIHPRAFREIHSITLKAEEPAILHLAEKWRVPFIVHPAEELQTVAGKYPTSAFVQKTVQVGNVALSSADIGSNGNVVT SRFAENGVTFAAGKLTKNSEVAK >Mature_343_residues MNTDKLAIIAVTERGRDLAITLTKTVAATIFVPGKHCNEQTNSLTPDFGTAMREIFTKYQALICIMATGIAVRTLAPAIE DKLSDPAVLVMDEHGKFIISLLSGHVGGANELTEQIAMITGGAAVITTATDRANVAAIDNIAKQLNGYLPDFKATTKRIN GLLAAGKEVGLYIDEPLDIDTRGFTMEEVSPQVYISTKYKLQVATHERIQLVPKQFILGVGCRKGVSAETIDAAFTHFCE QENIHPRAFREIHSITLKAEEPAILHLAEKWRVPFIVHPAEELQTVAGKYPTSAFVQKTVQVGNVALSSADIGSNGNVVT SRFAENGVTFAAGKLTKNSEVAK
Specific function: Unknown
COG id: COG2073
COG function: function code H; Cobalamin biosynthesis protein CbiG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021745 - InterPro: IPR021744 - InterPro: IPR002750 [H]
Pfam domain/function: PF01890 CbiG; PF11761 CbiG_mid; PF11760 CbiG_N [H]
EC number: NA
Molecular weight: Translated: 37017; Mature: 37017
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTDKLAIIAVTERGRDLAITLTKTVAATIFVPGKHCNEQTNSLTPDFGTAMREIFTKYQ CCCCCEEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH ALICIMATGIAVRTLAPAIEDKLSDPAVLVMDEHGKFIISLLSGHVGGANELTEQIAMIT HHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHCCCCCHHHHHHHHHHHC GGAAVITTATDRANVAAIDNIAKQLNGYLPDFKATTKRINGLLAAGKEVGLYIDEPLDID CCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC TRGFTMEEVSPQVYISTKYKLQVATHERIQLVPKQFILGVGCRKGVSAETIDAAFTHFCE CCCCCHHHCCCEEEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH QENIHPRAFREIHSITLKAEEPAILHLAEKWRVPFIVHPAEELQTVAGKYPTSAFVQKTV CCCCCHHHHHHHHHEEEECCCCCEEEEHHHCCCCEEECCHHHHHHHHCCCCHHHHHHHHH QVGNVALSSADIGSNGNVVTSRFAENGVTFAAGKLTKNSEVAK HHCCEEEECCCCCCCCCEEEEEHHHCCCEEEECCCCCCCCCCC >Mature Secondary Structure MNTDKLAIIAVTERGRDLAITLTKTVAATIFVPGKHCNEQTNSLTPDFGTAMREIFTKYQ CCCCCEEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH ALICIMATGIAVRTLAPAIEDKLSDPAVLVMDEHGKFIISLLSGHVGGANELTEQIAMIT HHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHCCCCCHHHHHHHHHHHC GGAAVITTATDRANVAAIDNIAKQLNGYLPDFKATTKRINGLLAAGKEVGLYIDEPLDID CCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC TRGFTMEEVSPQVYISTKYKLQVATHERIQLVPKQFILGVGCRKGVSAETIDAAFTHFCE CCCCCHHHCCCEEEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH QENIHPRAFREIHSITLKAEEPAILHLAEKWRVPFIVHPAEELQTVAGKYPTSAFVQKTV CCCCCHHHHHHHHHEEEECCCCCEEEEHHHCCCCEEECCHHHHHHHHCCCCHHHHHHHHH QVGNVALSSADIGSNGNVVTSRFAENGVTFAAGKLTKNSEVAK HHCCEEEECCCCCCCCCEEEEEHHHCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]