| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223784
Identifier: 226223784
GI number: 226223784
Start: 1192800
End: 1193372
Strand: Direct
Name: 226223784
Synonym: Lm4b_01188
Alternate gene names: NA
Gene position: 1192800-1193372 (Clockwise)
Preceding gene: 226223783
Following gene: 226223785
Centisome position: 40.95
GC content: 36.82
Gene sequence:
>573_bases ATGAGTATGGAACTAGACGCACTCATAAAAGCTGTCACTGAGGAAGTCATGAGACGATTACAACTTCCAGAGAAAAAAAT GATTATCATGGGACAAGATTCAGAACACACTCTCAGACAGTGTTATCTAAAAGAATATCAAGTTTCGCTTTATGATCGTT CGGAACGCGCTTGTGACATTTTACTACTGGAAGAATTGGATATCGCTGAATTAGCTCGAATCAGTTTGTTTGCTCCGATG AATAAAAAAGAACAATTTATTACAGATCATCTTTTAGCAGGGCGGCCAACTTGGATAATGAAGAGTGGTATCAAAGCGCA TGCTTATAAACGTTCCGCTAAATATGGTATCAGACAACTTTTTCAAGAATATGAGGAGAAACTGAGCCGATTTGGTGTCG AATTTATCGAAAGTCCGGTAAAAGAGACCAAAGAAAGTAAAGTCATCACCGAACAGGATGTTGAAAAACTTACTAAGAAC AAAAGCGAATTCATTTTGCCTAAAGGAAGTTTCTTAACACCACTTGCAAAAGATTACTTACAGGAAAAACGAATTAGCAT TAAAGAAAGTTAG
Upstream 100 bases:
>100_bases CTGATTTTGCTACATATATGCACATTGATTATGACGAAGCCAACGCATGTGGTTTTAAAAAGGGAATTCGAGGTCAAATA ATCAAGAAAACAAAGGCTAA
Downstream 100 bases:
>100_bases GAAGGAAGAGCGGCATGCAAATTGGAAAAGTTACCGGGAGTTTATGGGCAACAAGAAAAGACGAAAAACTGAATGGTTTA AAACTACTACTAGTAGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSMELDALIKAVTEEVMRRLQLPEKKMIIMGQDSEHTLRQCYLKEYQVSLYDRSERACDILLLEELDIAELARISLFAPM NKKEQFITDHLLAGRPTWIMKSGIKAHAYKRSAKYGIRQLFQEYEEKLSRFGVEFIESPVKETKESKVITEQDVEKLTKN KSEFILPKGSFLTPLAKDYLQEKRISIKES
Sequences:
>Translated_190_residues MSMELDALIKAVTEEVMRRLQLPEKKMIIMGQDSEHTLRQCYLKEYQVSLYDRSERACDILLLEELDIAELARISLFAPM NKKEQFITDHLLAGRPTWIMKSGIKAHAYKRSAKYGIRQLFQEYEEKLSRFGVEFIESPVKETKESKVITEQDVEKLTKN KSEFILPKGSFLTPLAKDYLQEKRISIKES >Mature_189_residues SMELDALIKAVTEEVMRRLQLPEKKMIIMGQDSEHTLRQCYLKEYQVSLYDRSERACDILLLEELDIAELARISLFAPMN KKEQFITDHLLAGRPTWIMKSGIKAHAYKRSAKYGIRQLFQEYEEKLSRFGVEFIESPVKETKESKVITEQDVEKLTKNK SEFILPKGSFLTPLAKDYLQEKRISIKES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22210; Mature: 22079
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMELDALIKAVTEEVMRRLQLPEKKMIIMGQDSEHTLRQCYLKEYQVSLYDRSERACDI CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEE LLLEELDIAELARISLFAPMNKKEQFITDHLLAGRPTWIMKSGIKAHAYKRSAKYGIRQL HEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHH FQEYEEKLSRFGVEFIESPVKETKESKVITEQDVEKLTKNKSEFILPKGSFLTPLAKDYL HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCCCCCCHHHHHHH QEKRISIKES HHHHCCCCCC >Mature Secondary Structure SMELDALIKAVTEEVMRRLQLPEKKMIIMGQDSEHTLRQCYLKEYQVSLYDRSERACDI CCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEE LLLEELDIAELARISLFAPMNKKEQFITDHLLAGRPTWIMKSGIKAHAYKRSAKYGIRQL HEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHH FQEYEEKLSRFGVEFIESPVKETKESKVITEQDVEKLTKNKSEFILPKGSFLTPLAKDYL HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCCCCCCHHHHHHH QEKRISIKES HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA