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The map label for this gene is zntR [C]

Identifier: 226223729

GI number: 226223729

Start: 1143569

End: 1144288

Strand: Reverse

Name: zntR [C]

Synonym: Lm4b_01132

Alternate gene names: 226223729

Gene position: 1144288-1143569 (Counterclockwise)

Preceding gene: 226223732

Following gene: 226223728

Centisome position: 39.29

GC content: 32.22

Gene sequence:

>720_bases
ATGCATACTCTTTCCAGTGGCGAAATCGCGCAACTTTTTCAAATATCTAAATATAAAATCCGTCATTATATTGATGAAGG
TATTCTAGTTCCTAAAAGAAATCCTGAAAATGGCTATTATTATTTTGAAGAAACGGATATTTACCGTTTATATCAAATTA
TTCTTTTTAGAAAAATTGGCTTTTCTATTCAAGAAATCAAAGAAAGTTTGCTTGGTGAAAAAGTGACTCCCATATTAGAG
CAGGCTGAACAAGATTTGCAACAAAAAATAGAAGAGTTAGTAGGAATTCAGAAAACGATTCAGAAAATCATCCATTCGCA
AAAAGAAATGCGTTTAAATGAAATCACTTTTGTAGCTAAAGACAATCGTTATTTTAAAAAAGTTCCTAACCAAATAATTG
ATCATAACACTATCAACTACTCCCAAGCTGCAAAACACAATTTACCAGATTTAGAGGAACCTTTTTACATTTTCTCCAAA
CAAGACACTGGTATAATCTGCCTTAAAAGCATAAAAAAAAGAAGTGATTATACTTTTCCGGCTGGCGAATACGCATGTAA
ATCTTTTATTGCCAAAGATGAAGCAACTATTGAAACGCAAATCCAACTATTTTTAGAAGAATTAAAATATCCTACAACAA
ACATGATATTATACGAAAACATCTACCCTTCACTCGCCTATCCGGACGCAATGGTTTACACAATGGAAGTGCCGCTATGA

Upstream 100 bases:

>100_bases
CAACGTTTGATAATGATTCTCATTGTCATTTATTTTTTTTATTTGACCGCGTGGTAACCACATAGTTTATACTAAAACTA
AATCACAAGGAGGTTTTCAG

Downstream 100 bases:

>100_bases
CCCTTTCCATTAAAAGCATCGATTCATTTGAAAAAGATAGCATCGTTGAAGAAGTAGCATCTTTAGTTTTCGCAGGGTTC
AAATCAAAGTTCACAAAAAA

Product: transcription regulator

Products: NA

Alternate protein names: MerR Family Transcriptional Regulator; Transcription Regulator

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MHTLSSGEIAQLFQISKYKIRHYIDEGILVPKRNPENGYYYFEETDIYRLYQIILFRKIGFSIQEIKESLLGEKVTPILE
QAEQDLQQKIEELVGIQKTIQKIIHSQKEMRLNEITFVAKDNRYFKKVPNQIIDHNTINYSQAAKHNLPDLEEPFYIFSK
QDTGIICLKSIKKRSDYTFPAGEYACKSFIAKDEATIETQIQLFLEELKYPTTNMILYENIYPSLAYPDAMVYTMEVPL

Sequences:

>Translated_239_residues
MHTLSSGEIAQLFQISKYKIRHYIDEGILVPKRNPENGYYYFEETDIYRLYQIILFRKIGFSIQEIKESLLGEKVTPILE
QAEQDLQQKIEELVGIQKTIQKIIHSQKEMRLNEITFVAKDNRYFKKVPNQIIDHNTINYSQAAKHNLPDLEEPFYIFSK
QDTGIICLKSIKKRSDYTFPAGEYACKSFIAKDEATIETQIQLFLEELKYPTTNMILYENIYPSLAYPDAMVYTMEVPL
>Mature_239_residues
MHTLSSGEIAQLFQISKYKIRHYIDEGILVPKRNPENGYYYFEETDIYRLYQIILFRKIGFSIQEIKESLLGEKVTPILE
QAEQDLQQKIEELVGIQKTIQKIIHSQKEMRLNEITFVAKDNRYFKKVPNQIIDHNTINYSQAAKHNLPDLEEPFYIFSK
QDTGIICLKSIKKRSDYTFPAGEYACKSFIAKDEATIETQIQLFLEELKYPTTNMILYENIYPSLAYPDAMVYTMEVPL

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28074; Mature: 28074

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTLSSGEIAQLFQISKYKIRHYIDEGILVPKRNPENGYYYFEETDIYRLYQIILFRKIG
CCCCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHC
FSIQEIKESLLGEKVTPILEQAEQDLQQKIEELVGIQKTIQKIIHSQKEMRLNEITFVAK
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
DNRYFKKVPNQIIDHNTINYSQAAKHNLPDLEEPFYIFSKQDTGIICLKSIKKRSDYTFP
CCHHHHHCCHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCEEHHHHHHHHCCCCCC
AGEYACKSFIAKDEATIETQIQLFLEELKYPTTNMILYENIYPSLAYPDAMVYTMEVPL
CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MHTLSSGEIAQLFQISKYKIRHYIDEGILVPKRNPENGYYYFEETDIYRLYQIILFRKIG
CCCCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHC
FSIQEIKESLLGEKVTPILEQAEQDLQQKIEELVGIQKTIQKIIHSQKEMRLNEITFVAK
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
DNRYFKKVPNQIIDHNTINYSQAAKHNLPDLEEPFYIFSKQDTGIICLKSIKKRSDYTFP
CCHHHHHCCHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCEEHHHHHHHHCCCCCC
AGEYACKSFIAKDEATIETQIQLFLEELKYPTTNMILYENIYPSLAYPDAMVYTMEVPL
CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA