| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223728
Identifier: 226223728
GI number: 226223728
Start: 1142976
End: 1143572
Strand: Reverse
Name: 226223728
Synonym: Lm4b_01131
Alternate gene names: NA
Gene position: 1143572-1142976 (Counterclockwise)
Preceding gene: 226223729
Following gene: 226223727
Centisome position: 39.26
GC content: 33.5
Gene sequence:
>597_bases ATGACCCTTTCCATTAAAAGCATCGATTCATTTGAAAAAGATAGCATCGTTGAAGAAGTAGCATCTTTAGTTTTCGCAGG GTTCAAATCAAAGTTCACAAAAAAGCTATTCAAAGAAACAGAAACGCATGGCATTATATACGCTTTTTGCCATTACATTT ATACAGAAAAAGGCGAAAACCTACTAATTGCAATACAAGATGAGTTAGTTTGCGGTTGCATATTTTTAACAAGCAAAGGT GACTCTCATCCAAAACTTTATCAAGCACTAAGAAAATTTTTATCATTTCCACAGTGCCTCAAATTGATTTTCTTACTCAG TCTTCTATCACACAAACCTGTTCAAAATGAACGATATATTGACTTTATAACCGTTTCGCCAAATTTTCGTGGTCAAGGTA TTGGAAAAATATTAATTTCTCATTACTTAGAAACTTTTCATAATGAACAGATTACTTTATACGTTGCCAAGAACAATAAT GGCGCCTACAAGTTGTACAAAACTTTAGGTTTCCAAGTGATTCAAAAAGAAAATAGCACATTGATGGGAGTACTCACCGG TATCAAAGAATGGCGAAAAATGGAGTGGATACAATGA
Upstream 100 bases:
>100_bases AAGAATTAAAATATCCTACAACAAACATGATATTATACGAAAACATCTACCCTTCACTCGCCTATCCGGACGCAATGGTT TACACAATGGAAGTGCCGCT
Downstream 100 bases:
>100_bases AACGTTGGAAAAAAATAACTATCGTAATGAGCGCAATCATCGTCATATTAGTAGCGATTCTTTTCATCGGAAATAATTTC GAAATGAACGAAACAAGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase Gnat Family
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTLSIKSIDSFEKDSIVEEVASLVFAGFKSKFTKKLFKETETHGIIYAFCHYIYTEKGENLLIAIQDELVCGCIFLTSKG DSHPKLYQALRKFLSFPQCLKLIFLLSLLSHKPVQNERYIDFITVSPNFRGQGIGKILISHYLETFHNEQITLYVAKNNN GAYKLYKTLGFQVIQKENSTLMGVLTGIKEWRKMEWIQ
Sequences:
>Translated_198_residues MTLSIKSIDSFEKDSIVEEVASLVFAGFKSKFTKKLFKETETHGIIYAFCHYIYTEKGENLLIAIQDELVCGCIFLTSKG DSHPKLYQALRKFLSFPQCLKLIFLLSLLSHKPVQNERYIDFITVSPNFRGQGIGKILISHYLETFHNEQITLYVAKNNN GAYKLYKTLGFQVIQKENSTLMGVLTGIKEWRKMEWIQ >Mature_197_residues TLSIKSIDSFEKDSIVEEVASLVFAGFKSKFTKKLFKETETHGIIYAFCHYIYTEKGENLLIAIQDELVCGCIFLTSKGD SHPKLYQALRKFLSFPQCLKLIFLLSLLSHKPVQNERYIDFITVSPNFRGQGIGKILISHYLETFHNEQITLYVAKNNNG AYKLYKTLGFQVIQKENSTLMGVLTGIKEWRKMEWIQ
Specific function: Unknown
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22834; Mature: 22703
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSIKSIDSFEKDSIVEEVASLVFAGFKSKFTKKLFKETETHGIIYAFCHYIYTEKGEN CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCE LLIAIQDELVCGCIFLTSKGDSHPKLYQALRKFLSFPQCLKLIFLLSLLSHKPVQNERYI EEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEE DFITVSPNFRGQGIGKILISHYLETFHNEQITLYVAKNNNGAYKLYKTLGFQVIQKENST EEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCH LMGVLTGIKEWRKMEWIQ HHHHHHHHHHHHHHCCCC >Mature Secondary Structure TLSIKSIDSFEKDSIVEEVASLVFAGFKSKFTKKLFKETETHGIIYAFCHYIYTEKGEN EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCE LLIAIQDELVCGCIFLTSKGDSHPKLYQALRKFLSFPQCLKLIFLLSLLSHKPVQNERYI EEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEE DFITVSPNFRGQGIGKILISHYLETFHNEQITLYVAKNNNGAYKLYKTLGFQVIQKENST EEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCH LMGVLTGIKEWRKMEWIQ HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA