| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223727
Identifier: 226223727
GI number: 226223727
Start: 1141981
End: 1143003
Strand: Reverse
Name: 226223727
Synonym: Lm4b_01130
Alternate gene names: NA
Gene position: 1143003-1141981 (Counterclockwise)
Preceding gene: 226223728
Following gene: 226223719
Centisome position: 39.24
GC content: 39.78
Gene sequence:
>1023_bases ATGGCGAAAAATGGAGTGGATACAATGAAACGTTGGAAAAAAATAACTATCGTAATGAGCGCAATCATCGTCATATTAGT AGCGATTCTTTTCATCGGAAATAATTTCGAAATGAACGAAACAAGAGTCACAATCCCAACTACTGGTGGAAAACTTTCTG CAGTCGTGACAACTCCAAAACACGAGAAACCAAAAGGCATTATTGTGTTTGTTCATGGTGACGGGGCACAAGAAGCAACT CAAAACGGTGGCTACAAACCGCTAATGGAACGCTTTGCCAAACAAGGATATATATCTGTTTCTTGGGATAAATTAGGCGT TGGTAAATCCTCAGGCAATTGGCTAAATCAGTCCATGGAAGACCTCGCAAACGAAGTCAACCAAGTTATTGAGTGGATGA AAGTGAAGTATCCTGATAGCACCGCCAAAATTGGCTTATGGGGCGCTAGTCAAGCCGGCTGGGTGATCCCAAAAGCAATG AATGCAAATAATGAGATTGCTTTCTCAATCCTTGCCGCCCCTGCTATTAACTGGATGCGTCAAGGAGAATACAACACTGG CTGGCAAGAGAAAGACGCTGGTAAAACAACGAAAGAAGTCAAGCAAGCACAACAAAATTTCCTCACTGACAGCACCCTTA TTTCTAAAAACAAAACCTACGAAAGCTACAAACAAAATGGCGGTAAAGAAAAAATGACCCCAGATCGCTACAACTTTATC CGCAAAAACATGAACCAAGATGCCACCCTAGACCTTTCAAAAGTAAAAGCAAAAATCTACCTCGTCTTAGCTGAAAAAGA TAAAAATGTTGATTCAGCAGAAACAAAAGATGTTTACACCCAACAAATTAAAAAAGAAAACCTAGAAACCAAAACCATCC CAAATGTCTCGCATCAAATGATTAATCCTGCCATCGCTAATTCAGAGCTACTCATCAATATTGTTGGCTTAATGGTTCCA AAATATTTTCTAGTAGACGATGCTTACTTAGATTACTGCGAGCAAGTAGTCTCTATACAATAA
Upstream 100 bases:
>100_bases AGAACAATAATGGCGCCTACAAGTTGTACAAAACTTTAGGTTTCCAAGTGATTCAAAAAGAAAATAGCACATTGATGGGA GTACTCACCGGTATCAAAGA
Downstream 100 bases:
>100_bases AAAGAAGACCAAATTAATGGTCTTCTTTTCTTATAGAATAATTTTTAAAATACGCCTGTTGCCAAGCTTGCGTTTTTTTC GCTGTTTTATTTAAATCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Fold Family Hydrolase; Hydrolase Protein; Hydrolase Of Alpha/Beta Superfamily; Type III Restriction Res Subunit Family; Serine Peptidase Family S; Hydrolase
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MAKNGVDTMKRWKKITIVMSAIIVILVAILFIGNNFEMNETRVTIPTTGGKLSAVVTTPKHEKPKGIIVFVHGDGAQEAT QNGGYKPLMERFAKQGYISVSWDKLGVGKSSGNWLNQSMEDLANEVNQVIEWMKVKYPDSTAKIGLWGASQAGWVIPKAM NANNEIAFSILAAPAINWMRQGEYNTGWQEKDAGKTTKEVKQAQQNFLTDSTLISKNKTYESYKQNGGKEKMTPDRYNFI RKNMNQDATLDLSKVKAKIYLVLAEKDKNVDSAETKDVYTQQIKKENLETKTIPNVSHQMINPAIANSELLINIVGLMVP KYFLVDDAYLDYCEQVVSIQ
Sequences:
>Translated_340_residues MAKNGVDTMKRWKKITIVMSAIIVILVAILFIGNNFEMNETRVTIPTTGGKLSAVVTTPKHEKPKGIIVFVHGDGAQEAT QNGGYKPLMERFAKQGYISVSWDKLGVGKSSGNWLNQSMEDLANEVNQVIEWMKVKYPDSTAKIGLWGASQAGWVIPKAM NANNEIAFSILAAPAINWMRQGEYNTGWQEKDAGKTTKEVKQAQQNFLTDSTLISKNKTYESYKQNGGKEKMTPDRYNFI RKNMNQDATLDLSKVKAKIYLVLAEKDKNVDSAETKDVYTQQIKKENLETKTIPNVSHQMINPAIANSELLINIVGLMVP KYFLVDDAYLDYCEQVVSIQ >Mature_339_residues AKNGVDTMKRWKKITIVMSAIIVILVAILFIGNNFEMNETRVTIPTTGGKLSAVVTTPKHEKPKGIIVFVHGDGAQEATQ NGGYKPLMERFAKQGYISVSWDKLGVGKSSGNWLNQSMEDLANEVNQVIEWMKVKYPDSTAKIGLWGASQAGWVIPKAMN ANNEIAFSILAAPAINWMRQGEYNTGWQEKDAGKTTKEVKQAQQNFLTDSTLISKNKTYESYKQNGGKEKMTPDRYNFIR KNMNQDATLDLSKVKAKIYLVLAEKDKNVDSAETKDVYTQQIKKENLETKTIPNVSHQMINPAIANSELLINIVGLMVPK YFLVDDAYLDYCEQVVSIQ
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38084; Mature: 37953
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNGVDTMKRWKKITIVMSAIIVILVAILFIGNNFEMNETRVTIPTTGGKLSAVVTTPK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEECCCCEEEEEEECCC HEKPKGIIVFVHGDGAQEATQNGGYKPLMERFAKQGYISVSWDKLGVGKSSGNWLNQSME CCCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHCCCEEEEEHHCCCCCCCCCHHHHHHH DLANEVNQVIEWMKVKYPDSTAKIGLWGASQAGWVIPKAMNANNEIAFSILAAPAINWMR HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEECEECCCCCCCEEEEEHHHHHHHHHH QGEYNTGWQEKDAGKTTKEVKQAQQNFLTDSTLISKNKTYESYKQNGGKEKMTPDRYNFI CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHH RKNMNQDATLDLSKVKAKIYLVLAEKDKNVDSAETKDVYTQQIKKENLETKTIPNVSHQM HHCCCCCCEEEHHHEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH INPAIANSELLINIVGLMVPKYFLVDDAYLDYCEQVVSIQ CCHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKNGVDTMKRWKKITIVMSAIIVILVAILFIGNNFEMNETRVTIPTTGGKLSAVVTTPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEECCCCEEEEEEECCC HEKPKGIIVFVHGDGAQEATQNGGYKPLMERFAKQGYISVSWDKLGVGKSSGNWLNQSME CCCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHCCCEEEEEHHCCCCCCCCCHHHHHHH DLANEVNQVIEWMKVKYPDSTAKIGLWGASQAGWVIPKAMNANNEIAFSILAAPAINWMR HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEECEECCCCCCCEEEEEHHHHHHHHHH QGEYNTGWQEKDAGKTTKEVKQAQQNFLTDSTLISKNKTYESYKQNGGKEKMTPDRYNFI CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHH RKNMNQDATLDLSKVKAKIYLVLAEKDKNVDSAETKDVYTQQIKKENLETKTIPNVSHQM HHCCCCCCEEEHHHEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH INPAIANSELLINIVGLMVPKYFLVDDAYLDYCEQVVSIQ CCHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA