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The map label for this gene is lytR [H]

Identifier: 226223644

GI number: 226223644

Start: 1055369

End: 1056334

Strand: Reverse

Name: lytR [H]

Synonym: Lm4b_01046

Alternate gene names: 226223644

Gene position: 1056334-1055369 (Counterclockwise)

Preceding gene: 226223645

Following gene: 226223631

Centisome position: 36.27

GC content: 35.92

Gene sequence:

>966_bases
ATGACAGAAACTAGGGCTGAAAAAAAGAAAAAAACAACGTCCACTTTTACTAAAGTTATGAAAATTGCTAGTGTTGCTCT
TTTAGGAATTATCTTCTTCTCTATAACAGGATTGGCAGCGAAGTATTACATCACCGTTCAAAATACCTTTTCAAAAATAA
ATGTCCCTCTAGAATCAAGTAATAAAACTTTAAGTGATTTAGAAAAGAAAAAACCTTTCTCAGTGTTACTCATGGGTTCA
GATGCCCGACCTGGTGAAAAAAATGGTCGCGCAGATACAATTATTCTTGCCACAGCTAATAAACAACAAAATGCCGTAGA
AATGGTTAGTATTCCTCGTGATACAAAAGTAGACTACGGAAATGGTGACATTGGTAAGATTAATGCCTCTTACTCCAACG
GTGGCCCCTCAGGAACAGTTTCAGCGGTCGAAAAACTTATGCCAGGAGTTCCCGTAGATTATTTCATTTCAATCAATATG
GAGGGCTTTAAAGACCTAGTTGATGCAGTTGGTGGTATTACTGTTTATAACGATATCGACTTAACAGAAGTAAATAGCAA
ATTTGTTAAAGGTAACATTACTTTAAACGGAACAGAAGCTTTACAATATGTTCGTATTCGTCATGAAGATCCTCGTGGTG
ACTTTGGTCGTCAAGATAGACAGCGCGATGTCATTATTGGTATTGCGAATAAGGTTATCAGTTCTTCCGGAGTTTCCAAT
TTTGAAAGCATTATGAAAGCCGTTGGCGATAATTTCCAAACTAATATGACGCTTACAGATATTACATCCATGGCTGCAAA
TTATTCTTCCGTACTTAAAAACGTCGATTCCCAAGAACTTAAAGGCGAAGGGGAAATGATTTATAGCGAGTCTTATGGAT
TTGATTTATATTACTTCGCCCCTGATAAAACAGATTTAGAGCGAATAATTACTATGTTTAAAAAGAGTTTAGATATTACT
GAATAA

Upstream 100 bases:

>100_bases
ACGATAAATGGTTTCAAAATCATTTATCGTTTTTTTGTTGATTTCTCAGAAAGACGATGGTATGTTTAAACAAACAAAAT
AGAAAGACGAGGAAAATTTT

Downstream 100 bases:

>100_bases
AAAAGATGACGGAAGCTTGAACGAGCTTCCGTCATCTTTTTTATTTATGTTTCGTAATAAGTGCATCCATCTCTGTAATT
ACTTTCGCGCATGCTTGTTG

Product: LytR protein

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTETRAEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYITVQNTFSKINVPLESSNKTLSDLEKKKPFSVLLMGS
DARPGEKNGRADTIILATANKQQNAVEMVSIPRDTKVDYGNGDIGKINASYSNGGPSGTVSAVEKLMPGVPVDYFISINM
EGFKDLVDAVGGITVYNDIDLTEVNSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVISSSGVSN
FESIMKAVGDNFQTNMTLTDITSMAANYSSVLKNVDSQELKGEGEMIYSESYGFDLYYFAPDKTDLERIITMFKKSLDIT
E

Sequences:

>Translated_321_residues
MTETRAEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYITVQNTFSKINVPLESSNKTLSDLEKKKPFSVLLMGS
DARPGEKNGRADTIILATANKQQNAVEMVSIPRDTKVDYGNGDIGKINASYSNGGPSGTVSAVEKLMPGVPVDYFISINM
EGFKDLVDAVGGITVYNDIDLTEVNSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVISSSGVSN
FESIMKAVGDNFQTNMTLTDITSMAANYSSVLKNVDSQELKGEGEMIYSESYGFDLYYFAPDKTDLERIITMFKKSLDIT
E
>Mature_320_residues
TETRAEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYITVQNTFSKINVPLESSNKTLSDLEKKKPFSVLLMGSD
ARPGEKNGRADTIILATANKQQNAVEMVSIPRDTKVDYGNGDIGKINASYSNGGPSGTVSAVEKLMPGVPVDYFISINME
GFKDLVDAVGGITVYNDIDLTEVNSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVISSSGVSNF
ESIMKAVGDNFQTNMTLTDITSMAANYSSVLKNVDSQELKGEGEMIYSESYGFDLYYFAPDKTDLERIITMFKKSLDITE

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 35274; Mature: 35142

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETRAEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYITVQNTFSKINVPLESS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCEEEECCCCCC
NKTLSDLEKKKPFSVLLMGSDARPGEKNGRADTIILATANKQQNAVEMVSIPRDTKVDYG
CCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEEECC
NGDIGKINASYSNGGPSGTVSAVEKLMPGVPVDYFISINMEGFKDLVDAVGGITVYNDID
CCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCEEEECCCC
LTEVNSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVISSSGVSN
CEECCCEEEEEEEEECHHHHEEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCHH
FESIMKAVGDNFQTNMTLTDITSMAANYSSVLKNVDSQELKGEGEMIYSESYGFDLYYFA
HHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCEEEEEEC
PDKTDLERIITMFKKSLDITE
CCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TETRAEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYITVQNTFSKINVPLESS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCEEEECCCCCC
NKTLSDLEKKKPFSVLLMGSDARPGEKNGRADTIILATANKQQNAVEMVSIPRDTKVDYG
CCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEEECC
NGDIGKINASYSNGGPSGTVSAVEKLMPGVPVDYFISINMEGFKDLVDAVGGITVYNDID
CCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCEEEECCCC
LTEVNSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVISSSGVSN
CEECCCEEEEEEEEECHHHHEEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCHH
FESIMKAVGDNFQTNMTLTDITSMAANYSSVLKNVDSQELKGEGEMIYSESYGFDLYYFA
HHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCEEEEEEC
PDKTDLERIITMFKKSLDITE
CCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA