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The map label for this gene is 226223607

Identifier: 226223607

GI number: 226223607

Start: 1020606

End: 1021031

Strand: Direct

Name: 226223607

Synonym: Lm4b_01009

Alternate gene names: NA

Gene position: 1020606-1021031 (Clockwise)

Preceding gene: 226223606

Following gene: 226223608

Centisome position: 35.04

GC content: 36.85

Gene sequence:

>426_bases
GTGAGAAGAGAGAAAACGATGGATACGTTAATTCGTTCGATTATGATTAAATCCAAACGGAAAATGGACGCAAAAGTAGC
TCAATTTGGGCTGACAACTCAACAAGCTAGAGTTCTAGGGTTTTTAAATGATAATGCGGCAAATGAAATTATCCAAAAAG
ATCTTCAGCGAATCTTCCAAACGCGTGGCGCAAGTATTACTAGCCTCATTCAAGGACTCGAGAAAAAAGAATTAATTTCT
CGTAAACCAAGCATTCGAGACGGCAGAGAAAAAGTGGTTACTTTAACTGAAGAAGGTAAACGAATAGTGGACGAATTTAA
TGAATCCTTCCCGCGTGAAGATGATAAAGCGAAAAAAATCCTTTCCGCTGACGAGTATAAAATCTTTATTGATCTACTTA
GTAAAATTGATGACAATACGGAATAA

Upstream 100 bases:

>100_bases
AACCTATTTGTACTTTCGCAAATAGGTTGTTTTTTTGCTTGACAATTTTTTGAAACGCGCTATAATTAGTTAGAATTCTA
ATTAATAAGGAGGAATACTC

Downstream 100 bases:

>100_bases
AAAAATTTAACTATATAGTTAGAGTTCTAACTAATTTTGAGGGGGAACCAAAATGAAACACTCAGATAATTATTATTTAA
CAAAAGCGAGCATTCCTAAA

Product: regulatory proteins (MarR family)

Products: NA

Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Proteins

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MRREKTMDTLIRSIMIKSKRKMDAKVAQFGLTTQQARVLGFLNDNAANEIIQKDLQRIFQTRGASITSLIQGLEKKELIS
RKPSIRDGREKVVTLTEEGKRIVDEFNESFPREDDKAKKILSADEYKIFIDLLSKIDDNTE

Sequences:

>Translated_141_residues
MRREKTMDTLIRSIMIKSKRKMDAKVAQFGLTTQQARVLGFLNDNAANEIIQKDLQRIFQTRGASITSLIQGLEKKELIS
RKPSIRDGREKVVTLTEEGKRIVDEFNESFPREDDKAKKILSADEYKIFIDLLSKIDDNTE
>Mature_141_residues
MRREKTMDTLIRSIMIKSKRKMDAKVAQFGLTTQQARVLGFLNDNAANEIIQKDLQRIFQTRGASITSLIQGLEKKELIS
RKPSIRDGREKVVTLTEEGKRIVDEFNESFPREDDKAKKILSADEYKIFIDLLSKIDDNTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16262; Mature: 16262

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRREKTMDTLIRSIMIKSKRKMDAKVAQFGLTTQQARVLGFLNDNAANEIIQKDLQRIFQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TRGASITSLIQGLEKKELISRKPSIRDGREKVVTLTEEGKRIVDEFNESFPREDDKAKKI
HCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHHHHHHHHCCCCCHHHHHH
LSADEYKIFIDLLSKIDDNTE
HCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRREKTMDTLIRSIMIKSKRKMDAKVAQFGLTTQQARVLGFLNDNAANEIIQKDLQRIFQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TRGASITSLIQGLEKKELISRKPSIRDGREKVVTLTEEGKRIVDEFNESFPREDDKAKKI
HCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHHHHHHHHCCCCCHHHHHH
LSADEYKIFIDLLSKIDDNTE
HCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA