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The map label for this gene is lemA

Identifier: 226223580

GI number: 226223580

Start: 996264

End: 996821

Strand: Direct

Name: lemA

Synonym: Lm4b_00982

Alternate gene names: 226223580

Gene position: 996264-996821 (Clockwise)

Preceding gene: 226223579

Following gene: 226223581

Centisome position: 34.2

GC content: 34.41

Gene sequence:

>558_bases
ATGATAGGATGGATTATTGCTATCGCTGTTGTTGTTATTTTAGTATTGATTTATTTTGGTCTATACAACAGCCTTGTAAA
ATACCGTAACCGTGTGGATGAAACTTGGGCGCAAATTGACGTACAATTAAAACGTAGATTTGATTTAATTCCTAATTTAG
TTGAAACAGTTAAAGGGTATGCAAAACATGAAAAAGAAACATTAACACAAGTAATTGAAGCTCGTAATAAAATGATGGAA
GTTCCTGCTGACAATCGTCAAGGTCAAATCGAAGCGGACAATATGTTAAGTGGAGCGCTTAAATCCATTTTTGCATTAGG
AGAAGCTTACCCAGATTTAAAAGCAAATACTTCTTTCATCGAATTGCAACATGAATTAACTACTACGGAAAATAAAGTGG
CTTATTCTCGCCAACTTTATAATACAACCGTAATGACTTACAACACAAAAGTACAATCTGTACCAACAAACATCGTTGCA
AAACTGCATAACTTTACAGAACGTGACATGCTTTCTATTCCTGAAGTAGAACGCGTTGCACCAAAAGTAGAGTTTTAA

Upstream 100 bases:

>100_bases
TGCGGAAGAAAAAATAAAAATCTCATGTTGCAGTAGGATTGTCGTGTACTCCCTAAGTAAGGTATAATGGGGTAAGTACA
TATGAAGGAGGAGATTAATT

Downstream 100 bases:

>100_bases
GCCATGAAGGAGAGCGAAAATTATGCTATTTGAACAAATTGCAGCAAATAAGCGAAAAACAATTTTTATTATTCTTGGCT
TTTTCATTTTCGTTCTTATG

Product: epitope LemA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MIGWIIAIAVVVILVLIYFGLYNSLVKYRNRVDETWAQIDVQLKRRFDLIPNLVETVKGYAKHEKETLTQVIEARNKMME
VPADNRQGQIEADNMLSGALKSIFALGEAYPDLKANTSFIELQHELTTTENKVAYSRQLYNTTVMTYNTKVQSVPTNIVA
KLHNFTERDMLSIPEVERVAPKVEF

Sequences:

>Translated_185_residues
MIGWIIAIAVVVILVLIYFGLYNSLVKYRNRVDETWAQIDVQLKRRFDLIPNLVETVKGYAKHEKETLTQVIEARNKMME
VPADNRQGQIEADNMLSGALKSIFALGEAYPDLKANTSFIELQHELTTTENKVAYSRQLYNTTVMTYNTKVQSVPTNIVA
KLHNFTERDMLSIPEVERVAPKVEF
>Mature_185_residues
MIGWIIAIAVVVILVLIYFGLYNSLVKYRNRVDETWAQIDVQLKRRFDLIPNLVETVKGYAKHEKETLTQVIEARNKMME
VPADNRQGQIEADNMLSGALKSIFALGEAYPDLKANTSFIELQHELTTTENKVAYSRQLYNTTVMTYNTKVQSVPTNIVA
KLHNFTERDMLSIPEVERVAPKVEF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 21195; Mature: 21195

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGWIIAIAVVVILVLIYFGLYNSLVKYRNRVDETWAQIDVQLKRRFDLIPNLVETVKGY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKHEKETLTQVIEARNKMMEVPADNRQGQIEADNMLSGALKSIFALGEAYPDLKANTSFI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
ELQHELTTTENKVAYSRQLYNTTVMTYNTKVQSVPTNIVAKLHNFTERDMLSIPEVERVA
HHHHHHHCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC
PKVEF
CCCCC
>Mature Secondary Structure
MIGWIIAIAVVVILVLIYFGLYNSLVKYRNRVDETWAQIDVQLKRRFDLIPNLVETVKGY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKHEKETLTQVIEARNKMMEVPADNRQGQIEADNMLSGALKSIFALGEAYPDLKANTSFI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
ELQHELTTTENKVAYSRQLYNTTVMTYNTKVQSVPTNIVAKLHNFTERDMLSIPEVERVA
HHHHHHHCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC
PKVEF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]