Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226223531
Identifier: 226223531
GI number: 226223531
Start: 948220
End: 948723
Strand: Direct
Name: 226223531
Synonym: Lm4b_00931
Alternate gene names: NA
Gene position: 948220-948723 (Clockwise)
Preceding gene: 226223530
Following gene: 226223532
Centisome position: 32.55
GC content: 37.1
Gene sequence:
>504_bases ATGGCGATTAGATTAAAGCGACTGGAGGAATGGGAAGGATTCACTGGTATTGCGCTCGTTCGAGAAGGTCTTAAAACAGA AGCACTTCATACAGAAATAAAAACAGCCTTCAAAGAAATGCTTCAACTTGCGCGAGAACTAGATGATTTTTCCAAACAAA AAACGTTTTATGGTATTTCTGTCCATAATATAGAAGATGGAATTACTCATTATTCGGTAATTCCAGTGGAACAAAAATAT CCTCATTTACAAGAACCGCTTGAGTGGATTGAAGTTCCGGCTCATACGTATTTTGTGGCTGAGCATATTCAGGATACAGA CATAAGTGAAAGTTATGAAGAGATTGCCAGAGCCATTCAAGAAAAAAATTACAAACCATATATTACAGCGAACAACCCCG TTTTTGACCCATTACCATTCAAATTGGAAGTGTATACGAAACAAGGAAGCGACGGAGCTAATATTGAAATAAGGATTCCT GTTGTAAAAGAATTGCATACGTAA
Upstream 100 bases:
>100_bases ATTAGCATCTTGTTTTAACTTGCTCTCAGACGGGTATTTACCATATGGTATACGGATAAATTAGCTTGTGTGAGATGCTT TTGTGAAGGAGTAGATAATC
Downstream 100 bases:
>100_bases GAAGAAGCCTGGGACTTTTGTTCTGGGCTTTTTTATACTAGCAAGCTGTTTTTGAGTGTGCTATAATAAAAACGCTATTT TGTGATTATTTTAACAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MAIRLKRLEEWEGFTGIALVREGLKTEALHTEIKTAFKEMLQLARELDDFSKQKTFYGISVHNIEDGITHYSVIPVEQKY PHLQEPLEWIEVPAHTYFVAEHIQDTDISESYEEIARAIQEKNYKPYITANNPVFDPLPFKLEVYTKQGSDGANIEIRIP VVKELHT
Sequences:
>Translated_167_residues MAIRLKRLEEWEGFTGIALVREGLKTEALHTEIKTAFKEMLQLARELDDFSKQKTFYGISVHNIEDGITHYSVIPVEQKY PHLQEPLEWIEVPAHTYFVAEHIQDTDISESYEEIARAIQEKNYKPYITANNPVFDPLPFKLEVYTKQGSDGANIEIRIP VVKELHT >Mature_166_residues AIRLKRLEEWEGFTGIALVREGLKTEALHTEIKTAFKEMLQLARELDDFSKQKTFYGISVHNIEDGITHYSVIPVEQKYP HLQEPLEWIEVPAHTYFVAEHIQDTDISESYEEIARAIQEKNYKPYITANNPVFDPLPFKLEVYTKQGSDGANIEIRIPV VKELHT
Specific function: Unknown
COG id: COG3708
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19371; Mature: 19240
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRLKRLEEWEGFTGIALVREGLKTEALHTEIKTAFKEMLQLARELDDFSKQKTFYGIS CCEECCHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE VHNIEDGITHYSVIPVEQKYPHLQEPLEWIEVPAHTYFVAEHIQDTDISESYEEIARAIQ EECCCCCCCEEEEEECHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHH EKNYKPYITANNPVFDPLPFKLEVYTKQGSDGANIEIRIPVVKELHT HCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEECHHHCCCC >Mature Secondary Structure AIRLKRLEEWEGFTGIALVREGLKTEALHTEIKTAFKEMLQLARELDDFSKQKTFYGIS CEECCHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE VHNIEDGITHYSVIPVEQKYPHLQEPLEWIEVPAHTYFVAEHIQDTDISESYEEIARAIQ EECCCCCCCEEEEEECHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHH EKNYKPYITANNPVFDPLPFKLEVYTKQGSDGANIEIRIPVVKELHT HCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEECHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA