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The map label for this gene is yrhG [H]

Identifier: 226223532

GI number: 226223532

Start: 948837

End: 949649

Strand: Direct

Name: yrhG [H]

Synonym: Lm4b_00932

Alternate gene names: 226223532

Gene position: 948837-949649 (Clockwise)

Preceding gene: 226223531

Following gene: 226223533

Centisome position: 32.58

GC content: 41.94

Gene sequence:

>813_bases
GTGGGATATTATAGCCCGCAGGAAGTAACAGAGATTACGATTGAAAAAGGGACCCAAAAAGCAAATTCAAGTACGTTAAC
GCTTGTGTTGTTAGGCTTTTTAGGTGGGGCCTTTATATCTCTTGGTTACTTATTATACATACGTGCAGTAGGAACAATGC
CTCACGAATGGGGAAGCTTTGCAACGCTTATCGGCGCCAGTCTTTTTCCGGTTGGCCTCGTTTGTATTTTGCTAGGTGGA
GGAGAATTAATTACCGGCAACATGATGGCTGTCGCGATTGCTTGGTACGACAAAAAGATTTCCTTCCAACAATTACTTAG
AAACTGGGCGATTGTGTCTGTCATGAACTTAGTGGGTGCATTTTTTGTCGCTTACTTCTTCGGACATTTCGTTGGCTTAA
CAGAAGGCGATTTCTTACCAAAAACGCTAGCTACAGCTGGTGCAAAAATTAACGATCCTTTCTGGGTTGCTTTTGTTTCC
GGAATTGGTTGTAACTGGTTTGTTGGGATTGCGGTTTGGCTTTGCTACGCGGCTAAAGATTTCGCAGGAAAAATCCTTGG
TATTTGGTTCCCGGTTATGGCATTTGTTGCTATCGGATTTCAGCACGTTGTCGCCAACATGTTTATTATCCCAGCTGCAA
TTTTCGCTGGTTACTATTCATGGGCGGATTTCATTTGGAACGTCATCCCAGTGTACTTAGGAAATGTAGTCGGTGGAGCA
GTTTTTGTTAGCTTATTCTACTTCCTTGCTTATAAGAAAAACGCACCTAAAAAAGTAAAAGAAGAAATACACCAACCAAT
TGAAGAAAGTTAA

Upstream 100 bases:

>100_bases
ACTTTTGTTCTGGGCTTTTTTATACTAGCAAGCTGTTTTTGAGTGTGCTATAATAAAAACGCTATTTTGTGATTATTTTA
ACAAGAAGGAAGGGATTCAT

Downstream 100 bases:

>100_bases
GACCGAAAAAGCTAGTTACATTCGATGTAGCTAGCTTTTTTTGAAAAAAATTAAAGTTTTTTAGAGACTGTTCTCGTTCC
CGCCATGTTGCGATAGAATG

Product: transporter (formate)

Products: formate [Periplasm]; formate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MGYYSPQEVTEITIEKGTQKANSSTLTLVLLGFLGGAFISLGYLLYIRAVGTMPHEWGSFATLIGASLFPVGLVCILLGG
GELITGNMMAVAIAWYDKKISFQQLLRNWAIVSVMNLVGAFFVAYFFGHFVGLTEGDFLPKTLATAGAKINDPFWVAFVS
GIGCNWFVGIAVWLCYAAKDFAGKILGIWFPVMAFVAIGFQHVVANMFIIPAAIFAGYYSWADFIWNVIPVYLGNVVGGA
VFVSLFYFLAYKKNAPKKVKEEIHQPIEES

Sequences:

>Translated_270_residues
MGYYSPQEVTEITIEKGTQKANSSTLTLVLLGFLGGAFISLGYLLYIRAVGTMPHEWGSFATLIGASLFPVGLVCILLGG
GELITGNMMAVAIAWYDKKISFQQLLRNWAIVSVMNLVGAFFVAYFFGHFVGLTEGDFLPKTLATAGAKINDPFWVAFVS
GIGCNWFVGIAVWLCYAAKDFAGKILGIWFPVMAFVAIGFQHVVANMFIIPAAIFAGYYSWADFIWNVIPVYLGNVVGGA
VFVSLFYFLAYKKNAPKKVKEEIHQPIEES
>Mature_269_residues
GYYSPQEVTEITIEKGTQKANSSTLTLVLLGFLGGAFISLGYLLYIRAVGTMPHEWGSFATLIGASLFPVGLVCILLGGG
ELITGNMMAVAIAWYDKKISFQQLLRNWAIVSVMNLVGAFFVAYFFGHFVGLTEGDFLPKTLATAGAKINDPFWVAFVSG
IGCNWFVGIAVWLCYAAKDFAGKILGIWFPVMAFVAIGFQHVVANMFIIPAAIFAGYYSWADFIWNVIPVYLGNVVGGAV
FVSLFYFLAYKKNAPKKVKEEIHQPIEES

Specific function: Involved In The Bidirectional Transport Of Formate. [C]

COG id: COG2116

COG function: function code P; Formate/nitrite family of transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FNT transporter (TC 2.A.44) family [H]

Homologues:

Organism=Escherichia coli, GI1787132, Length=275, Percent_Identity=32.3636363636364, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1788837, Length=262, Percent_Identity=29.3893129770992, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87082249, Length=242, Percent_Identity=31.8181818181818, Blast_Score=90, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6321779, Length=255, Percent_Identity=29.0196078431373, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000292 [H]

Pfam domain/function: PF01226 Form_Nir_trans [H]

EC number: NA

Molecular weight: Translated: 29569; Mature: 29438

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS00213 LIPOCALIN ; PS01005 FORMATE_NITRITE_TP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYYSPQEVTEITIEKGTQKANSSTLTLVLLGFLGGAFISLGYLLYIRAVGTMPHEWGSF
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ATLIGASLFPVGLVCILLGGGELITGNMMAVAIAWYDKKISFQQLLRNWAIVSVMNLVGA
HHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FFVAYFFGHFVGLTEGDFLPKTLATAGAKINDPFWVAFVSGIGCNWFVGIAVWLCYAAKD
HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
FAGKILGIWFPVMAFVAIGFQHVVANMFIIPAAIFAGYYSWADFIWNVIPVYLGNVVGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFVSLFYFLAYKKNAPKKVKEEIHQPIEES
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
GYYSPQEVTEITIEKGTQKANSSTLTLVLLGFLGGAFISLGYLLYIRAVGTMPHEWGSF
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ATLIGASLFPVGLVCILLGGGELITGNMMAVAIAWYDKKISFQQLLRNWAIVSVMNLVGA
HHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FFVAYFFGHFVGLTEGDFLPKTLATAGAKINDPFWVAFVSGIGCNWFVGIAVWLCYAAKD
HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
FAGKILGIWFPVMAFVAIGFQHVVANMFIIPAAIFAGYYSWADFIWNVIPVYLGNVVGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFVSLFYFLAYKKNAPKKVKEEIHQPIEES
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate [Cytoplasm]; formate [Periplasm] [C]

Specific reaction: formate [Cytoplasm] = formate [Periplasm] formate [Periplasm] = formate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]