Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226223524
Identifier: 226223524
GI number: 226223524
Start: 941929
End: 942603
Strand: Direct
Name: 226223524
Synonym: Lm4b_00924
Alternate gene names: NA
Gene position: 941929-942603 (Clockwise)
Preceding gene: 226223523
Following gene: 226223525
Centisome position: 32.34
GC content: 39.41
Gene sequence:
>675_bases ATGGCAGAGAAAACAATAGTAGAAAAATTACAACTGACTAAATATAAAGAAGCAGTTATCCTAAATCAACCAAATGGAGC GGATTATTTCCAAAATCTAGCAAATTACGAAGAAAAACTAGCAGACAAACAATACGATTTAATTTTCGATTTTGTGGAAA CGCTAGAAGAATTAATTACGTTCGTGCAAAAAGTTATTGCTGAAAATAAACTTGCTGCGAATGGTTATTTATTTTTCGCC TACCCTAAAAAAGGCAATAAAAAGTTCGCTACATATGTACACCGCGATGAACTCATGCCAGCGCTTAAAACCGATGAAGA AGGTTACGTCGACGGTAGCACACTCAAATTCACACGAATGGTCGCGCTCGATGAAACGTACACGGTAGTTGGTCTAAAAG AAGCGGCAAAACTAAAAGCGAAGGGCGTTAAGAAAAATAACCCTTCCGCAGATGAATACGCCGACCATGTACCTCTAGTC GCCGAATTTCTAGCAGACAAAGGCGATTTACAAGCCTTCTACAACAATCTAGCGACAGGATACCAGCGGGTTTGGGCGCG CTATATTTACTCTGCCAAACAACCAGCGACACAAGAAAAAAGACGTTTAGAGATGGTTGATATTTTGAGCCAAGGTTATA AAACGAAAGATCTTTACCGACAAGGGAAAAAGTAA
Upstream 100 bases:
>100_bases CAAGCCGTGGTGCTTGGTCTTTTTTCTGTTTAGTTTGGCTTGATAACTTAAAGGGAAGGCTATATACTGAAACCAAACAA TACAAACGAGGTGCTGGAAT
Downstream 100 bases:
>100_bases CCAAATAATTTTATTTGGTTATTTTTGCGTTTGAAACTGCTTCTTTATGTAAAAATGTCTAGGCGTGATAGAATAGAAGA GGAATAAGACGAAGGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MAEKTIVEKLQLTKYKEAVILNQPNGADYFQNLANYEEKLADKQYDLIFDFVETLEELITFVQKVIAENKLAANGYLFFA YPKKGNKKFATYVHRDELMPALKTDEEGYVDGSTLKFTRMVALDETYTVVGLKEAAKLKAKGVKKNNPSADEYADHVPLV AEFLADKGDLQAFYNNLATGYQRVWARYIYSAKQPATQEKRRLEMVDILSQGYKTKDLYRQGKK
Sequences:
>Translated_224_residues MAEKTIVEKLQLTKYKEAVILNQPNGADYFQNLANYEEKLADKQYDLIFDFVETLEELITFVQKVIAENKLAANGYLFFA YPKKGNKKFATYVHRDELMPALKTDEEGYVDGSTLKFTRMVALDETYTVVGLKEAAKLKAKGVKKNNPSADEYADHVPLV AEFLADKGDLQAFYNNLATGYQRVWARYIYSAKQPATQEKRRLEMVDILSQGYKTKDLYRQGKK >Mature_223_residues AEKTIVEKLQLTKYKEAVILNQPNGADYFQNLANYEEKLADKQYDLIFDFVETLEELITFVQKVIAENKLAANGYLFFAY PKKGNKKFATYVHRDELMPALKTDEEGYVDGSTLKFTRMVALDETYTVVGLKEAAKLKAKGVKKNNPSADEYADHVPLVA EFLADKGDLQAFYNNLATGYQRVWARYIYSAKQPATQEKRRLEMVDILSQGYKTKDLYRQGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25701; Mature: 25569
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKTIVEKLQLTKYKEAVILNQPNGADYFQNLANYEEKLADKQYDLIFDFVETLEELIT CCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH FVQKVIAENKLAANGYLFFAYPKKGNKKFATYVHRDELMPALKTDEEGYVDGSTLKFTRM HHHHHHHHCCEECCCEEEEEECCCCCCHHHHHHHHHHHCHHHCCCCCCCCCCCCCHHHHE VALDETYTVVGLKEAAKLKAKGVKKNNPSADEYADHVPLVAEFLADKGDLQAFYNNLATG EEECCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YQRVWARYIYSAKQPATQEKRRLEMVDILSQGYKTKDLYRQGKK HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCC >Mature Secondary Structure AEKTIVEKLQLTKYKEAVILNQPNGADYFQNLANYEEKLADKQYDLIFDFVETLEELIT CHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH FVQKVIAENKLAANGYLFFAYPKKGNKKFATYVHRDELMPALKTDEEGYVDGSTLKFTRM HHHHHHHHCCEECCCEEEEEECCCCCCHHHHHHHHHHHCHHHCCCCCCCCCCCCCHHHHE VALDETYTVVGLKEAAKLKAKGVKKNNPSADEYADHVPLVAEFLADKGDLQAFYNNLATG EEECCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YQRVWARYIYSAKQPATQEKRRLEMVDILSQGYKTKDLYRQGKK HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA