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The map label for this gene is 226223506

Identifier: 226223506

GI number: 226223506

Start: 926585

End: 926863

Strand: Direct

Name: 226223506

Synonym: Lm4b_00905

Alternate gene names: NA

Gene position: 926585-926863 (Clockwise)

Preceding gene: 226223505

Following gene: 226223507

Centisome position: 31.81

GC content: 41.58

Gene sequence:

>279_bases
GTGTTAGAGAAAGAAAAGCGGATGATAATATCCGTAGAACTGACACAGGAAATGATACAAGAACTCGACGTAGTTGTAGA
AAAAGAAAAAATGGGGCGGAGTGAAGTTATAATGGAAGCAACGCAACAGTTTTTACAAGAGAAAAGGGCTCGCGAATTAA
GAGACGAGATGGAGCGCGGCTATGCAGAAATGGCGACAATTAATTTCGCTATCGCATGCGAGTGTACCCATGTCGAAGCA
GAAGCAGAAGACAGGAATATTAGTATTTTAGGAGGTTAA

Upstream 100 bases:

>100_bases
ATTCTTAACAATAAAATGCGAAATAACTCTTTTCTTCAAGGCGTGATAATGGTACGATATAGTTGTTACTTACAGGTACG
AGGCTTTGGGGGTGTGACAC

Downstream 100 bases:

>100_bases
TGGCTGATGGTGAAGCGTGGTGACGTATACTACGCGGACCTTTCCCCCGTGGTCGGAAGCGAGCAAGGGGGAATACGGCC
TGTTCTCATCATTCAAAATG

Product: YdcD protein

Products: NA

Alternate protein names: YdcD Protein; Antitoxin EndoAI

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MLEKEKRMIISVELTQEMIQELDVVVEKEKMGRSEVIMEATQQFLQEKRARELRDEMERGYAEMATINFAIACECTHVEA
EAEDRNISILGG

Sequences:

>Translated_92_residues
MLEKEKRMIISVELTQEMIQELDVVVEKEKMGRSEVIMEATQQFLQEKRARELRDEMERGYAEMATINFAIACECTHVEA
EAEDRNISILGG
>Mature_92_residues
MLEKEKRMIISVELTQEMIQELDVVVEKEKMGRSEVIMEATQQFLQEKRARELRDEMERGYAEMATINFAIACECTHVEA
EAEDRNISILGG

Specific function: Unknown

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10651; Mature: 10651

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
7.6 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKEKRMIISVELTQEMIQELDVVVEKEKMGRSEVIMEATQQFLQEKRARELRDEMERG
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAEMATINFAIACECTHVEAEAEDRNISILGG
HHHHHHHEEEEEEEEEECCCCCCCCCEEEECC
>Mature Secondary Structure
MLEKEKRMIISVELTQEMIQELDVVVEKEKMGRSEVIMEATQQFLQEKRARELRDEMERG
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAEMATINFAIACECTHVEAEAEDRNISILGG
HHHHHHHEEEEEEEEEECCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA