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The map label for this gene is wapA [H]

Identifier: 226223499

GI number: 226223499

Start: 919374

End: 920762

Strand: Direct

Name: wapA [H]

Synonym: Lm4b_00898

Alternate gene names: 226223499

Gene position: 919374-920762 (Clockwise)

Preceding gene: 226223498

Following gene: 226223501

Centisome position: 31.56

GC content: 37.94

Gene sequence:

>1389_bases
ATGAAAAAAAGATGGTTAGTATTTGCAATTATATGTTTAATTATCACTGGATTTTTAAGCCCAAAAGCAGAAGCTGCAAC
AGATTACGGCAGCAGTTTTTTTACTAATGTATCATTACAAAATCAAAACGGGGAGCAAACAACGAATTTTAAGGAAAATA
GTAAAGTGCGAGTGGCGTATGATTTTGTCATTACACAGCCAGTTGCAAGCGGAGAAACAATGACGCTTACTATTCCTAAT
CAACTAAAATTAATTAATTATGGCGGATTCCCTCTTATGGATTCGCAAGGAAACACTATTGCAAATGCAACCATTGATCA
AGCAACGGGAACCATTACATTAACTTTTACCGACTATGTAAATACACATACAGATTTAAGTGGCCGCCTCTTTTATAACG
CAACTTTTAACAGCAAAAATATTCAAACAGATCAAGTAAATCCAATCGCATTTCCGGTGAAAAATTCGACCCAAACGATA
AACGCCTTTATTAGCAAAGTTAATACTGGTGGCGGTACGGGCTCACCAACAATCGTTTTTAAACAAGGGCGAATGGATGA
TAAAGACTTGAGTATTTTACATTGGACTGTTACTTTAAATAATGCGCTGACACCTATTGATAATGCCGTTTACACGGATA
CGCTTGGCTCAGGGCAAAATCTGCTTGGAAGTGCAACAATCAAATACCGCGATGCCAACAAAAAAGTGATAACTACCAAT
ATCCAGCCAATTACGCTGGATGCAGATCGCAATTTTGAATTATCTATTGGCACGTTAAATAATCAATCTGTTGTCATTAC
TTATGATACGAAAATTACGACGAAACAAAAAAGCTATACGAATAAAGCAACACTATCCGGTGATAACCTAGATGCTGTTT
CGAGAAATGCGACAGTGAATGATTACGGTAGCGGTGGACAAGGAACAGGAACCCCGCCAGCCCCACCGGTTAAAGAAGAA
CCACCATTTATTCCGGCTGAAAAGCAACCGATTGAAAAAACAGTCGAAACAGATTTTGGTCCACTTGAAATCGTTAAAGA
TTCCGAACAAAATGGTAAAATTAAAGTCATCTATAAAGTGAAAGATGGCGATACATTACCTGGAGTAGCTAATAAGTTTG
ATGTCTCTGTTGCAGAAATTAAAGACTGGAACAATCTCACATCGGATACTTTACAAGCCGGTCAAAAATTACAACTAACG
ATTGAAAAAACACTCTTATCCAAAATCACCATTCCACCTGTGCAAAAAGTGACTAGCACAACAAGCGTAGACGGTGTCGT
AAAAGCAACAGGGGTTTTACCTCATACTGGGGATTCGAACCCGTTTATCCCATTTGTAACAGGGGTAAGTTTAGTAGCAC
TTGGTTTTACATTTGGACGTAGAAATTAA

Upstream 100 bases:

>100_bases
TTGTTCTGGCGTTTTTTTGTGCGCAAAATCATTGTACGGTTTTTAACAAGCAAGTTGTGGGAACTATAAAGATAGATGTT
TTAAGGGGGAATGAAACAAA

Downstream 100 bases:

>100_bases
CGAAAAAGGAAGCACTCTTCTTATGAATGAGTGCTTCCTTTTTTATTATAATAAGTGCCCTTTTTTTCGATGCGTCACTT
GTTGGTTTTTAGAATGATCA

Product: peptidoglycan linked protein (LPXTG)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKKRWLVFAIICLIITGFLSPKAEAATDYGSSFFTNVSLQNQNGEQTTNFKENSKVRVAYDFVITQPVASGETMTLTIPN
QLKLINYGGFPLMDSQGNTIANATIDQATGTITLTFTDYVNTHTDLSGRLFYNATFNSKNIQTDQVNPIAFPVKNSTQTI
NAFISKVNTGGGTGSPTIVFKQGRMDDKDLSILHWTVTLNNALTPIDNAVYTDTLGSGQNLLGSATIKYRDANKKVITTN
IQPITLDADRNFELSIGTLNNQSVVITYDTKITTKQKSYTNKATLSGDNLDAVSRNATVNDYGSGGQGTGTPPAPPVKEE
PPFIPAEKQPIEKTVETDFGPLEIVKDSEQNGKIKVIYKVKDGDTLPGVANKFDVSVAEIKDWNNLTSDTLQAGQKLQLT
IEKTLLSKITIPPVQKVTSTTSVDGVVKATGVLPHTGDSNPFIPFVTGVSLVALGFTFGRRN

Sequences:

>Translated_462_residues
MKKRWLVFAIICLIITGFLSPKAEAATDYGSSFFTNVSLQNQNGEQTTNFKENSKVRVAYDFVITQPVASGETMTLTIPN
QLKLINYGGFPLMDSQGNTIANATIDQATGTITLTFTDYVNTHTDLSGRLFYNATFNSKNIQTDQVNPIAFPVKNSTQTI
NAFISKVNTGGGTGSPTIVFKQGRMDDKDLSILHWTVTLNNALTPIDNAVYTDTLGSGQNLLGSATIKYRDANKKVITTN
IQPITLDADRNFELSIGTLNNQSVVITYDTKITTKQKSYTNKATLSGDNLDAVSRNATVNDYGSGGQGTGTPPAPPVKEE
PPFIPAEKQPIEKTVETDFGPLEIVKDSEQNGKIKVIYKVKDGDTLPGVANKFDVSVAEIKDWNNLTSDTLQAGQKLQLT
IEKTLLSKITIPPVQKVTSTTSVDGVVKATGVLPHTGDSNPFIPFVTGVSLVALGFTFGRRN
>Mature_462_residues
MKKRWLVFAIICLIITGFLSPKAEAATDYGSSFFTNVSLQNQNGEQTTNFKENSKVRVAYDFVITQPVASGETMTLTIPN
QLKLINYGGFPLMDSQGNTIANATIDQATGTITLTFTDYVNTHTDLSGRLFYNATFNSKNIQTDQVNPIAFPVKNSTQTI
NAFISKVNTGGGTGSPTIVFKQGRMDDKDLSILHWTVTLNNALTPIDNAVYTDTLGSGQNLLGSATIKYRDANKKVITTN
IQPITLDADRNFELSIGTLNNQSVVITYDTKITTKQKSYTNKATLSGDNLDAVSRNATVNDYGSGGQGTGTPPAPPVKEE
PPFIPAEKQPIEKTVETDFGPLEIVKDSEQNGKIKVIYKVKDGDTLPGVANKFDVSVAEIKDWNNLTSDTLQAGQKLQLT
IEKTLLSKITIPPVQKVTSTTSVDGVVKATGVLPHTGDSNPFIPFVTGVSLVALGFTFGRRN

Specific function: Unknown

COG id: COG4932

COG function: function code M; Predicted outer membrane protein

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR008456
- InterPro:   IPR011252
- InterPro:   IPR019948
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF05737 Collagen_bind; PF00746 Gram_pos_anchor [H]

EC number: NA

Molecular weight: Translated: 49996; Mature: 49996

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRWLVFAIICLIITGFLSPKAEAATDYGSSFFTNVSLQNQNGEQTTNFKENSKVRVAY
CCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEE
DFVITQPVASGETMTLTIPNQLKLINYGGFPLMDSQGNTIANATIDQATGTITLTFTDYV
EEEEECCCCCCCEEEEECCCEEEEEEECCCEEECCCCCEEEEEEEECCCCEEEEEEEECC
NTHTDLSGRLFYNATFNSKNIQTDQVNPIAFPVKNSTQTINAFISKVNTGGGTGSPTIVF
CCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEE
KQGRMDDKDLSILHWTVTLNNALTPIDNAVYTDTLGSGQNLLGSATIKYRDANKKVITTN
ECCCCCCCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCEEEEEC
IQPITLDADRNFELSIGTLNNQSVVITYDTKITTKQKSYTNKATLSGDNLDAVSRNATVN
CEEEEEECCCCEEEEEEEECCCEEEEEECCEEEECCCCCCCCEEECCCCCCHHCCCCEEC
DYGSGGQGTGTPPAPPVKEEPPFIPAEKQPIEKTVETDFGPLEIVKDSEQNGKIKVIYKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCEEEEEEE
KDGDTLPGVANKFDVSVAEIKDWNNLTSDTLQAGQKLQLTIEKTLLSKITIPPVQKVTST
CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCEEEEEEEHHHHHHCCCCCHHHHHCC
TSVDGVVKATGVLPHTGDSNPFIPFVTGVSLVALGFTFGRRN
CCCCCEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKRWLVFAIICLIITGFLSPKAEAATDYGSSFFTNVSLQNQNGEQTTNFKENSKVRVAY
CCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEE
DFVITQPVASGETMTLTIPNQLKLINYGGFPLMDSQGNTIANATIDQATGTITLTFTDYV
EEEEECCCCCCCEEEEECCCEEEEEEECCCEEECCCCCEEEEEEEECCCCEEEEEEEECC
NTHTDLSGRLFYNATFNSKNIQTDQVNPIAFPVKNSTQTINAFISKVNTGGGTGSPTIVF
CCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEE
KQGRMDDKDLSILHWTVTLNNALTPIDNAVYTDTLGSGQNLLGSATIKYRDANKKVITTN
ECCCCCCCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCEEEEEC
IQPITLDADRNFELSIGTLNNQSVVITYDTKITTKQKSYTNKATLSGDNLDAVSRNATVN
CEEEEEECCCCEEEEEEEECCCEEEEEECCEEEECCCCCCCCEEECCCCCCHHCCCCEEC
DYGSGGQGTGTPPAPPVKEEPPFIPAEKQPIEKTVETDFGPLEIVKDSEQNGKIKVIYKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCEEEEEEE
KDGDTLPGVANKFDVSVAEIKDWNNLTSDTLQAGQKLQLTIEKTLLSKITIPPVQKVTST
CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCEEEEEEEHHHHHHCCCCCHHHHHCC
TSVDGVVKATGVLPHTGDSNPFIPFVTGVSLVALGFTFGRRN
CCCCCEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2761387; 12397186 [H]