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The map label for this gene is ydbS [H]

Identifier: 226223501

GI number: 226223501

Start: 921417

End: 921899

Strand: Direct

Name: ydbS [H]

Synonym: Lm4b_00900

Alternate gene names: 226223501

Gene position: 921417-921899 (Clockwise)

Preceding gene: 226223499

Following gene: 226223502

Centisome position: 31.63

GC content: 39.34

Gene sequence:

>483_bases
ATGGAACTTGATAATTTAGAAAAGAAATTACCGGAGAAAATTAAAACAGTTTGGCGGCAAACGGAGGGAATTGCTGTTCT
TACTTTTCTACTTTGTTCGGTTGCAGCGGCAATCATTTTGTATTATGCAGGAGCTTCGGTGTGGTGGAGTGCGATCGGTT
TTGGATTAACGGTACTTTATGCTGCCTTTATTTACTTATTCATTATTCCGTTTCGTTTTGCACGTTGGAGCTACCAGATT
AAACCAGACGAAATGGAAATTCAGCACGGCATTATTTTTAGAAGTCGTGTCTTAATTCCGATGATTCGCATTCAACACGT
GGAAACGGAGCAAGGTCCGCTACTTAGAAGACAAAAACTCGTTTCTTTATCGATTACAACTGCTGCAAAAACACATAAGA
TTGAAGCGGTAAACGAGTCTGAATCAGATGAACTTAGACATCATATTCTTGAACTTGTGAAGGTGGCGAAAGAAGATGTT
TGA

Upstream 100 bases:

>100_bases
AGAAATATGAACAAACTATGAATAAAACATGATAGATTTAAAAAATCGCTACCAATTTAGCTGTTTTTAACGTAAGATAA
AAGAAAAAAGGAGTAGAGCA

Downstream 100 bases:

>100_bases
AGAAAGACGCCTCCATCCGATTGCCCTCATTAAAGAAATTATTACGAACGTAAGACGCAATATTGTTCCTATCGTCGTCG
GTTTATTTTCCGTTTTCCGC

Product: YdbS protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MELDNLEKKLPEKIKTVWRQTEGIAVLTFLLCSVAAAIILYYAGASVWWSAIGFGLTVLYAAFIYLFIIPFRFARWSYQI
KPDEMEIQHGIIFRSRVLIPMIRIQHVETEQGPLLRRQKLVSLSITTAAKTHKIEAVNESESDELRHHILELVKVAKEDV

Sequences:

>Translated_160_residues
MELDNLEKKLPEKIKTVWRQTEGIAVLTFLLCSVAAAIILYYAGASVWWSAIGFGLTVLYAAFIYLFIIPFRFARWSYQI
KPDEMEIQHGIIFRSRVLIPMIRIQHVETEQGPLLRRQKLVSLSITTAAKTHKIEAVNESESDELRHHILELVKVAKEDV
>Mature_160_residues
MELDNLEKKLPEKIKTVWRQTEGIAVLTFLLCSVAAAIILYYAGASVWWSAIGFGLTVLYAAFIYLFIIPFRFARWSYQI
KPDEMEIQHGIIFRSRVLIPMIRIQHVETEQGPLLRRQKLVSLSITTAAKTHKIEAVNESESDELRHHILELVKVAKEDV

Specific function: Unknown

COG id: COG3402

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 18423; Mature: 18423

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDNLEKKLPEKIKTVWRQTEGIAVLTFLLCSVAAAIILYYAGASVWWSAIGFGLTVLY
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFIYLFIIPFRFARWSYQIKPDEMEIQHGIIFRSRVLIPMIRIQHVETEQGPLLRRQKL
HHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VSLSITTAAKTHKIEAVNESESDELRHHILELVKVAKEDV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELDNLEKKLPEKIKTVWRQTEGIAVLTFLLCSVAAAIILYYAGASVWWSAIGFGLTVLY
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFIYLFIIPFRFARWSYQIKPDEMEIQHGIIFRSRVLIPMIRIQHVETEQGPLLRRQKL
HHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VSLSITTAAKTHKIEAVNESESDELRHHILELVKVAKEDV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]