| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is cshA [H]
Identifier: 226223484
GI number: 226223484
Start: 906336
End: 907889
Strand: Direct
Name: cshA [H]
Synonym: Lm4b_00882
Alternate gene names: 226223484
Gene position: 906336-907889 (Clockwise)
Preceding gene: 226223483
Following gene: 226223485
Centisome position: 31.12
GC content: 43.31
Gene sequence:
>1554_bases TTGACAAAATTTTCGGAGTTCGGACTGGACGAAAAAATTGTAAAATCAGTAAATCGGATGGGGTTTGAAGAAGCAACACC AATCCAAGAAAAGACAATTCCACTAGGACTAGCAGGTAAAGACTTAATCGGGCAAGCACAAACAGGTACTGGTAAAACAG CCGCTTTTGGTCTTCCAATGATTCACAAAATTGACCAAAAGAGTAACAACGTACAAGCTTTAATTATTGCTCCAACACGT GAACTTGCAATCCAAGTTTCTGAAGAGCTTTATAAACTTAGCTATGACAAACATGTACGTGTGCTAGCGGTTTACGGTGG TAGCGATATCAGCCGTCAAATCCGTTCACTTAAGAAAAACCCACAAATCGTAGTTGGTACGCCAGGACGTATTTTGGATC ATATTAACCGTCGCACACTGAAACTAGACCACGTGGAAACACTTGTACTAGATGAAGCAGACGAAATGCTAAACATGGGC TTCATTGATGATATCGAAACTATTCTAAAAGAAGTACCAGCAGAACGTCAAACTTTACTATTTTCTGCAACAATGCCTGA TCCAATTCGCCGTATCGGTGAACGTTTCATGCATAGCCCAGAACTTATTCGCATTAAAGCGAAAGAAATGACTGCACTAT TAATTGAACAATTCTTCGTAAAAGTGCATGAAAAAGAAAAATTTGACGTATTATCTCGTTTATTAGACGTTCAAGCACCG GAACTAGCTATTGTTTTCGGTCGTACGAAACGTCGTGTAGACGAACTATCTCGCGCGCTTGATATGCGTGGTTACGTGGC TGAAGGTATCCACGGTGACTTGACGCAAGCAAAACGTATGAGTGTACTACGCAAATTTAAAGAAGGAAAAATTGATGTTC TAGTTGCAACAGACGTAGCAGCTCGTGGACTTGATATTTCCGGCGTAACACATGTATATAACTATGATATTCCACAAGAT CCAGAAAGCTATGTTCACCGTATCGGTCGTACTGGTCGTGCTGGTAAAGAAGGTATGGCGATTACTTTCGTACAACCTCG TGAAATGGGTTATTTACGTATTGTGGAAGAAACTACGAAAAAACGTATGCAACCACTTCAAGCTCCTACTTGGGACGAAG CATTTGCAGGCCAATTACGCGTAGCAACTGAAAAAATTCAAGAAGCAATCACAGAAGAAAACTTAGCTGACTACAAAACG TTTGCTAACGAACTTCTTGAAAAATACGATGCAACTGACATCGCAGCAGCAATGCTTAAAATGTTAGCGAAAGAGCCAGA CAAAACTCCTGTCCATATTACTGAAGAGCGTCCATTACCATCCCGTGGTGGCGGTGGCTACAAAGGTAAAAATGGTAAAG GCGGCAAAGGTGGCGGCTATCGCGGCGGAAGCGGCAAAGGCGGAAGCTACCGCGATCGTAACAACAGCGGCAAAGGTCGT CGTAGCGGCGGCGGAAGCGGTTCTGGCGGTGGTGGCAATCGTGATCGTCGTAGTGGCGGCGGAGAACAACGCAGCGGCGG CAACAAAGGCAACTACTCACAAAAATCTAAATAA
Upstream 100 bases:
>100_bases AACTGCAAATGAACAGACAAACAATCGTAATAAGCGTATTGTGATGAATTATAAAAGTAGCTCTCCTACCAAACTTTAAA CAGGTAAAGGAGAAATGACA
Downstream 100 bases:
>100_bases GATTATTAGACAAATAGTTACCATATAGATAGACTGTAGATAAAGAAGTTTTTAACTTTATCTACAGTCTATTTTTTTAT AAATACTAATGTTAAGGATA
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGLPMIHKIDQKSNNVQALIIAPTR ELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLKKNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMG FIDDIETILKEVPAERQTLLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQAP ELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVAARGLDISGVTHVYNYDIPQD PESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEETTKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKT FANELLEKYDATDIAAAMLKMLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGKGR RSGGGSGSGGGGNRDRRSGGGEQRSGGNKGNYSQKSK
Sequences:
>Translated_517_residues MTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGLPMIHKIDQKSNNVQALIIAPTR ELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLKKNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMG FIDDIETILKEVPAERQTLLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQAP ELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVAARGLDISGVTHVYNYDIPQD PESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEETTKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKT FANELLEKYDATDIAAAMLKMLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGKGR RSGGGSGSGGGGNRDRRSGGGEQRSGGNKGNYSQKSK >Mature_516_residues TKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGLPMIHKIDQKSNNVQALIIAPTRE LAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLKKNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGF IDDIETILKEVPAERQTLLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQAPE LAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVAARGLDISGVTHVYNYDIPQDP ESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEETTKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTF ANELLEKYDATDIAAAMLKMLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGKGRR SGGGSGSGGGGNRDRRSGGGEQRSGGNKGNYSQKSK
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=355, Percent_Identity=41.1267605633803, Blast_Score=287, Evalue=2e-77, Organism=Homo sapiens, GI301171475, Length=399, Percent_Identity=39.0977443609023, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI301171467, Length=399, Percent_Identity=39.0977443609023, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI87196351, Length=399, Percent_Identity=39.0977443609023, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI164664518, Length=367, Percent_Identity=35.6948228882834, Blast_Score=262, Evalue=7e-70, Organism=Homo sapiens, GI169881239, Length=402, Percent_Identity=39.0547263681592, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI13514809, Length=402, Percent_Identity=39.0547263681592, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI20149629, Length=387, Percent_Identity=35.9173126614987, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI222352149, Length=344, Percent_Identity=41.2790697674419, Blast_Score=258, Evalue=8e-69, Organism=Homo sapiens, GI45446747, Length=362, Percent_Identity=38.3977900552486, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI45446743, Length=362, Percent_Identity=38.3977900552486, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI224593278, Length=394, Percent_Identity=35.2791878172589, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI4758138, Length=355, Percent_Identity=40.5633802816901, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI13129006, Length=370, Percent_Identity=39.7297297297297, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI50659095, Length=426, Percent_Identity=36.8544600938967, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI83700235, Length=355, Percent_Identity=38.5915492957746, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI4503529, Length=355, Percent_Identity=38.3098591549296, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI31542656, Length=372, Percent_Identity=36.2903225806452, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI148613856, Length=372, Percent_Identity=37.9032258064516, Blast_Score=245, Evalue=8e-65, Organism=Homo sapiens, GI38201710, Length=372, Percent_Identity=37.9032258064516, Blast_Score=245, Evalue=8e-65, Organism=Homo sapiens, GI262231852, Length=389, Percent_Identity=37.5321336760925, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI13518015, Length=389, Percent_Identity=37.5321336760925, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI216548263, Length=389, Percent_Identity=37.5321336760925, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI41327771, Length=376, Percent_Identity=37.5, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI262118318, Length=389, Percent_Identity=37.5321336760925, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI41327773, Length=357, Percent_Identity=40.0560224089636, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI21040371, Length=345, Percent_Identity=37.3913043478261, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI4758112, Length=345, Percent_Identity=36.5217391304348, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI18375623, Length=345, Percent_Identity=36.5217391304348, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI55749865, Length=344, Percent_Identity=36.6279069767442, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI21071032, Length=355, Percent_Identity=37.7464788732394, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI51094101, Length=445, Percent_Identity=32.5842696629214, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI164419743, Length=445, Percent_Identity=32.5842696629214, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI188035877, Length=347, Percent_Identity=36.5994236311239, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI164419732, Length=373, Percent_Identity=36.1930294906166, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI13514831, Length=362, Percent_Identity=35.6353591160221, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI41327776, Length=387, Percent_Identity=32.8165374677003, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI6005743, Length=385, Percent_Identity=35.3246753246753, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI8922886, Length=385, Percent_Identity=35.0649350649351, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=32.3308270676692, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI62241022, Length=369, Percent_Identity=35.7723577235772, Blast_Score=205, Evalue=8e-53, Organism=Homo sapiens, GI256223453, Length=360, Percent_Identity=33.3333333333333, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI41327779, Length=382, Percent_Identity=33.5078534031414, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI38327634, Length=360, Percent_Identity=34.1666666666667, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI62241024, Length=347, Percent_Identity=35.1585014409222, Blast_Score=192, Evalue=9e-49, Organism=Homo sapiens, GI38569505, Length=371, Percent_Identity=32.6145552560647, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI38569503, Length=371, Percent_Identity=32.6145552560647, Blast_Score=182, Evalue=9e-46, Organism=Homo sapiens, GI17505907, Length=409, Percent_Identity=30.5623471882641, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI9966805, Length=342, Percent_Identity=29.8245614035088, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI256773275, Length=397, Percent_Identity=26.9521410579345, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=31.3432835820896, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI154759257, Length=465, Percent_Identity=27.0967741935484, Blast_Score=139, Evalue=8e-33, Organism=Homo sapiens, GI20336298, Length=214, Percent_Identity=34.1121495327103, Blast_Score=120, Evalue=3e-27, Organism=Escherichia coli, GI87082221, Length=428, Percent_Identity=45.3271028037383, Blast_Score=370, Evalue=1e-103, Organism=Escherichia coli, GI1787605, Length=378, Percent_Identity=42.8571428571429, Blast_Score=296, Evalue=2e-81, Organism=Escherichia coli, GI1787016, Length=375, Percent_Identity=42.9333333333333, Blast_Score=295, Evalue=7e-81, Organism=Escherichia coli, GI1790214, Length=350, Percent_Identity=40.8571428571429, Blast_Score=274, Evalue=9e-75, Organism=Escherichia coli, GI1788930, Length=353, Percent_Identity=40.7932011331445, Blast_Score=232, Evalue=4e-62, Organism=Escherichia coli, GI48994977, Length=368, Percent_Identity=23.6413043478261, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71987143, Length=354, Percent_Identity=40.3954802259887, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI71995724, Length=355, Percent_Identity=41.1267605633803, Blast_Score=282, Evalue=3e-76, Organism=Caenorhabditis elegans, GI17507121, Length=355, Percent_Identity=40.8450704225352, Blast_Score=282, Evalue=3e-76, Organism=Caenorhabditis elegans, GI17552114, Length=365, Percent_Identity=35.6164383561644, Blast_Score=261, Evalue=6e-70, Organism=Caenorhabditis elegans, GI17555296, Length=387, Percent_Identity=35.4005167958656, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI17510559, Length=427, Percent_Identity=35.5971896955504, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17510307, Length=396, Percent_Identity=37.8787878787879, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17510309, Length=396, Percent_Identity=37.8787878787879, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI71995514, Length=392, Percent_Identity=38.0102040816327, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI32565321, Length=380, Percent_Identity=36.5789473684211, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI71995718, Length=402, Percent_Identity=36.81592039801, Blast_Score=238, Evalue=7e-63, Organism=Caenorhabditis elegans, GI115533224, Length=331, Percent_Identity=40.1812688821752, Blast_Score=238, Evalue=8e-63, Organism=Caenorhabditis elegans, GI71999644, Length=353, Percent_Identity=35.6940509915014, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71999646, Length=353, Percent_Identity=35.6940509915014, Blast_Score=236, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17537549, Length=376, Percent_Identity=35.6382978723404, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71982858, Length=345, Percent_Identity=36.231884057971, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=39.6600566572238, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17507877, Length=368, Percent_Identity=38.5869565217391, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=38.2749326145553, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI115532548, Length=391, Percent_Identity=33.2480818414322, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=33.5106382978723, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17552642, Length=394, Percent_Identity=34.7715736040609, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17507945, Length=373, Percent_Identity=36.4611260053619, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17507881, Length=368, Percent_Identity=36.4130434782609, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17536103, Length=396, Percent_Identity=33.3333333333333, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17536101, Length=396, Percent_Identity=33.0808080808081, Blast_Score=201, Evalue=7e-52, Organism=Caenorhabditis elegans, GI193208216, Length=418, Percent_Identity=32.2966507177034, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI17536099, Length=396, Percent_Identity=33.0808080808081, Blast_Score=201, Evalue=9e-52, Organism=Caenorhabditis elegans, GI17509811, Length=355, Percent_Identity=32.9577464788732, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17505370, Length=375, Percent_Identity=33.3333333333333, Blast_Score=196, Evalue=4e-50, Organism=Caenorhabditis elegans, GI193206561, Length=346, Percent_Identity=31.7919075144509, Blast_Score=194, Evalue=9e-50, Organism=Caenorhabditis elegans, GI17553716, Length=359, Percent_Identity=31.4763231197772, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI25148203, Length=411, Percent_Identity=29.4403892944039, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17507641, Length=436, Percent_Identity=30.2752293577982, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI71990816, Length=385, Percent_Identity=30.6493506493506, Blast_Score=161, Evalue=8e-40, Organism=Caenorhabditis elegans, GI17556951, Length=364, Percent_Identity=29.6703296703297, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI32564046, Length=421, Percent_Identity=30.6413301662708, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17508543, Length=375, Percent_Identity=27.7333333333333, Blast_Score=148, Evalue=8e-36, Organism=Caenorhabditis elegans, GI25148291, Length=364, Percent_Identity=28.021978021978, Blast_Score=139, Evalue=5e-33, Organism=Caenorhabditis elegans, GI71982862, Length=203, Percent_Identity=35.9605911330049, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI25148205, Length=347, Percent_Identity=26.8011527377522, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI71997889, Length=351, Percent_Identity=27.0655270655271, Blast_Score=121, Evalue=8e-28, Organism=Caenorhabditis elegans, GI71987152, Length=108, Percent_Identity=37.962962962963, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17565430, Length=386, Percent_Identity=23.5751295336788, Blast_Score=89, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6324217, Length=359, Percent_Identity=38.9972144846797, Blast_Score=265, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6325138, Length=387, Percent_Identity=39.2764857881137, Blast_Score=265, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6320224, Length=371, Percent_Identity=37.466307277628, Blast_Score=264, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6322912, Length=365, Percent_Identity=38.9041095890411, Blast_Score=259, Evalue=5e-70, Organism=Saccharomyces cerevisiae, GI6322323, Length=365, Percent_Identity=38.9041095890411, Blast_Score=259, Evalue=5e-70, Organism=Saccharomyces cerevisiae, GI6321856, Length=362, Percent_Identity=40.0552486187845, Blast_Score=259, Evalue=7e-70, Organism=Saccharomyces cerevisiae, GI6324778, Length=364, Percent_Identity=39.2857142857143, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6320041, Length=354, Percent_Identity=36.4406779661017, Blast_Score=250, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=40.7821229050279, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=37.8917378917379, Blast_Score=236, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6324620, Length=384, Percent_Identity=34.6354166666667, Blast_Score=227, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6320119, Length=353, Percent_Identity=33.9943342776204, Blast_Score=226, Evalue=5e-60, Organism=Saccharomyces cerevisiae, GI6320173, Length=426, Percent_Identity=32.8638497652582, Blast_Score=225, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6321963, Length=379, Percent_Identity=35.0923482849604, Blast_Score=223, Evalue=6e-59, Organism=Saccharomyces cerevisiae, GI6319714, Length=412, Percent_Identity=33.495145631068, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6323947, Length=370, Percent_Identity=34.3243243243243, Blast_Score=206, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6320449, Length=404, Percent_Identity=34.1584158415842, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6320400, Length=387, Percent_Identity=33.8501291989664, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=32.5358851674641, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=32.409972299169, Blast_Score=189, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6321111, Length=369, Percent_Identity=34.4173441734417, Blast_Score=186, Evalue=7e-48, Organism=Saccharomyces cerevisiae, GI6321267, Length=400, Percent_Identity=33.25, Blast_Score=181, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6323306, Length=427, Percent_Identity=30.9133489461358, Blast_Score=179, Evalue=7e-46, Organism=Saccharomyces cerevisiae, GI6324366, Length=346, Percent_Identity=26.3005780346821, Blast_Score=121, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6322876, Length=218, Percent_Identity=33.0275229357798, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6321374, Length=395, Percent_Identity=23.0379746835443, Blast_Score=91, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6323844, Length=433, Percent_Identity=21.7090069284065, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24645031, Length=355, Percent_Identity=39.7183098591549, Blast_Score=278, Evalue=8e-75, Organism=Drosophila melanogaster, GI28574962, Length=350, Percent_Identity=40.2857142857143, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=39.3767705382436, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI21356161, Length=405, Percent_Identity=36.5432098765432, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=40.8963585434174, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI21355075, Length=349, Percent_Identity=38.6819484240688, Blast_Score=258, Evalue=8e-69, Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=37.466307277628, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=37.466307277628, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=37.466307277628, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=37.466307277628, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24585582, Length=380, Percent_Identity=36.3157894736842, Blast_Score=254, Evalue=9e-68, Organism=Drosophila melanogaster, GI24644479, Length=351, Percent_Identity=39.8860398860399, Blast_Score=252, Evalue=3e-67, Organism=Drosophila melanogaster, GI281361218, Length=351, Percent_Identity=39.8860398860399, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24644481, Length=351, Percent_Identity=39.8860398860399, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24644483, Length=351, Percent_Identity=39.8860398860399, Blast_Score=252, Evalue=5e-67, Organism=Drosophila melanogaster, GI24644487, Length=351, Percent_Identity=39.8860398860399, Blast_Score=252, Evalue=5e-67, Organism=Drosophila melanogaster, GI45551833, Length=351, Percent_Identity=39.8860398860399, Blast_Score=252, Evalue=5e-67, Organism=Drosophila melanogaster, GI24644485, Length=351, Percent_Identity=39.8860398860399, Blast_Score=252, Evalue=5e-67, Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=39.4101876675603, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI24662330, Length=351, Percent_Identity=38.4615384615385, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=33.7912087912088, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=33.7912087912088, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI18857967, Length=388, Percent_Identity=37.1134020618557, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI24584994, Length=379, Percent_Identity=36.9393139841689, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI17136814, Length=373, Percent_Identity=36.4611260053619, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=38.0952380952381, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24581954, Length=346, Percent_Identity=36.9942196531792, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24581952, Length=346, Percent_Identity=36.9942196531792, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24581956, Length=346, Percent_Identity=36.9942196531792, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI28575014, Length=353, Percent_Identity=33.9943342776204, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=38.5852090032154, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI28571808, Length=360, Percent_Identity=34.7222222222222, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI28571809, Length=360, Percent_Identity=34.7222222222222, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI21355559, Length=381, Percent_Identity=34.6456692913386, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI17647335, Length=351, Percent_Identity=31.3390313390313, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24643725, Length=384, Percent_Identity=31.7708333333333, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24642822, Length=377, Percent_Identity=30.7692307692308, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI28571338, Length=453, Percent_Identity=30.0220750551876, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI18859659, Length=453, Percent_Identity=30.0220750551876, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24666101, Length=359, Percent_Identity=32.3119777158774, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24668515, Length=337, Percent_Identity=32.6409495548961, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI20130173, Length=347, Percent_Identity=31.1239193083574, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI19920478, Length=346, Percent_Identity=29.7687861271676, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI17136666, Length=436, Percent_Identity=25.6880733944954, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24640164, Length=346, Percent_Identity=24.8554913294798, Blast_Score=120, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 57081; Mature: 56950
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGLPM CCCCHHCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCHH IHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLKKN HHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCC PQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQTLL CCEEEECCHHHHHHHCHHEEEHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHCCCCHHEEE FSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQAP EECCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC ELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVA CEEEEECCHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHH ARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEETTK HCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH KRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANELLEKYDATDIAAAMLK HHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH MLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGKGR HHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RSGGGSGSGGGGNRDRRSGGGEQRSGGNKGNYSQKSK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGLPM CCCHHCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCHH IHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLKKN HHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCC PQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQTLL CCEEEECCHHHHHHHCHHEEEHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHCCCCHHEEE FSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQAP EECCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC ELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVA CEEEEECCHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHH ARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEETTK HCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH KRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANELLEKYDATDIAAAMLK HHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH MLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGKGR HHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RSGGGSGSGGGGNRDRRSGGGEQRSGGNKGNYSQKSK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA