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The map label for this gene is ydfK [H]

Identifier: 226223411

GI number: 226223411

Start: 822858

End: 823559

Strand: Reverse

Name: ydfK [H]

Synonym: Lm4b_00809

Alternate gene names: 226223411

Gene position: 823559-822858 (Counterclockwise)

Preceding gene: 226223412

Following gene: 226223408

Centisome position: 28.27

GC content: 41.88

Gene sequence:

>702_bases
ATGGTTCTACTTGGTGCGCTAGTGAATGGGCTTGGGATTTTGATTGGCTCTGTTATTGGCATGAAATTACATAATATCCC
TGAACGTATGAAAGACACGGTCATGAAAGGGATGGGTTTATCCGTTATCGTCCTTGGCATTCAAATGGCATTTAAAACGA
GCAACTCGCTTATTGTCATTTTAAGTATTTGTTTTGGAGCCGTTATTGGGGAATGGCTTAATATAGATTATCATCTGAAT
CAGCTCGGGCACTGGATTGAACGTAAAGTCGGTGCCAAGGGAAAAAGTAATGTTTCAAAAGGCTTTGTGACAGCTACACT
TATTTTTGTGATTGGTGCGATGGGGATTATTGGTGCGCTTGATAGCGGCATTCGCGGCAATCATGATGTACTTTATACGA
AATCGGTGATGGATGGATTTATCGCCCTACTTCTTAGTACGACACTTGGTTGGGGCGTTATGCTTTCTGCGATTCCAGTG
TTTCTCTTTGAAGGCATTATCGCGTTATTCGCAACCCAGATTAATCAATTCGTTCCGGCAGACCTGATGGCACTAATTAT
AAAGGAATTAACGGCTACAGGCGGGATTATGATTTTGGCAATTGGTCTAAACTTGCTTGGTTTAACCAAGATTCGGGTCG
CGAATCTTGTTCCGGGGATTTTAGTCGTTGCGCTGATTATTACCGGGCTTTATTATTTTTAA

Upstream 100 bases:

>100_bases
GATCACTTTGATCCTTCGACTTTTTTGTACAAAATAAAACTCCCAATTGGCGAAAACTTCCTGTATACTATTGCTATATG
TAAAAAAAGGGAGGAAGAAA

Downstream 100 bases:

>100_bases
AAGAAAAAACAGAGAATCGCTCATCTCTGTTTTTTTAATTTCGTTTAAATGGCGCTTCTACATCTAAACTTATTAAATCT
GTATATGTTTGCGGTTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MVLLGALVNGLGILIGSVIGMKLHNIPERMKDTVMKGMGLSVIVLGIQMAFKTSNSLIVILSICFGAVIGEWLNIDYHLN
QLGHWIERKVGAKGKSNVSKGFVTATLIFVIGAMGIIGALDSGIRGNHDVLYTKSVMDGFIALLLSTTLGWGVMLSAIPV
FLFEGIIALFATQINQFVPADLMALIIKELTATGGIMILAIGLNLLGLTKIRVANLVPGILVVALIITGLYYF

Sequences:

>Translated_233_residues
MVLLGALVNGLGILIGSVIGMKLHNIPERMKDTVMKGMGLSVIVLGIQMAFKTSNSLIVILSICFGAVIGEWLNIDYHLN
QLGHWIERKVGAKGKSNVSKGFVTATLIFVIGAMGIIGALDSGIRGNHDVLYTKSVMDGFIALLLSTTLGWGVMLSAIPV
FLFEGIIALFATQINQFVPADLMALIIKELTATGGIMILAIGLNLLGLTKIRVANLVPGILVVALIITGLYYF
>Mature_233_residues
MVLLGALVNGLGILIGSVIGMKLHNIPERMKDTVMKGMGLSVIVLGIQMAFKTSNSLIVILSICFGAVIGEWLNIDYHLN
QLGHWIERKVGAKGKSNVSKGFVTATLIFVIGAMGIIGALDSGIRGNHDVLYTKSVMDGFIALLLSTTLGWGVMLSAIPV
FLFEGIIALFATQINQFVPADLMALIIKELTATGGIMILAIGLNLLGLTKIRVANLVPGILVVALIITGLYYF

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24794; Mature: 24794

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLGALVNGLGILIGSVIGMKLHNIPERMKDTVMKGMGLSVIVLGIQMAFKTSNSLIVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
LSICFGAVIGEWLNIDYHLNQLGHWIERKVGAKGKSNVSKGFVTATLIFVIGAMGIIGAL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DSGIRGNHDVLYTKSVMDGFIALLLSTTLGWGVMLSAIPVFLFEGIIALFATQINQFVPA
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DLMALIIKELTATGGIMILAIGLNLLGLTKIRVANLVPGILVVALIITGLYYF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLLGALVNGLGILIGSVIGMKLHNIPERMKDTVMKGMGLSVIVLGIQMAFKTSNSLIVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
LSICFGAVIGEWLNIDYHLNQLGHWIERKVGAKGKSNVSKGFVTATLIFVIGAMGIIGAL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DSGIRGNHDVLYTKSVMDGFIALLLSTTLGWGVMLSAIPVFLFEGIIALFATQINQFVPA
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DLMALIIKELTATGGIMILAIGLNLLGLTKIRVANLVPGILVVALIITGLYYF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]