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The map label for this gene is ywnB [H]

Identifier: 226223412

GI number: 226223412

Start: 823674

End: 824315

Strand: Reverse

Name: ywnB [H]

Synonym: Lm4b_00810

Alternate gene names: 226223412

Gene position: 824315-823674 (Counterclockwise)

Preceding gene: 226223413

Following gene: 226223411

Centisome position: 28.3

GC content: 40.34

Gene sequence:

>642_bases
ATGAAAATTGGTATCATTGGTGCTACGGGCCGAGCTGGTTCGAGAATTTTAGAAGAAGCAAAAAATCGTGGTCACGAAGT
AACAGCCATTGTTAGAAACGCCGGGAAAATCACGCAAACACACAAAGATATTAATATTTTACAAAAAGATATTTTTGATT
TAACTCTTTCAGATTTATCAGACCAAAATGTCGTTGTTGATGCTTATGGCATCAGTCCAGACGAAGCAGAAAAACATGTC
ACTTCCCTTGATCACTTAATTTCTGTTTTAAATGGAACTGTGTCTCCGCGCTTACTTGTCGTTGGCGGAGCAGCTAGTCT
GCAAATTGATGAAGACGGAAACACGCTTTTAGAGTCCAAGGGCCTACGGGAAGCGCCTTACTATCCAACTGCACGTGCGC
AAGCGAAACAATTAGAGCATTTAAAATCACATCAAGCAGAATTCAGTTGGACTTACATTAGCCCTTCTGCCATGTTTGAG
CCCGGCGAACGCACTGGAGACTATCAAATAGGAAAAGATCATCTCTTATTTGGTAGCGATGGTAATAGTTTTATCAGTAT
GGAAGACTATGCAATTGCTGTTTTAGATGAAATTGAACGACCTAATCACTTAAATGAACGCTTTACAGTAGCCGGAAAAT
AG

Upstream 100 bases:

>100_bases
ACGCCGCAAAAAAATAAATGTTTCCCAGTCCCCTCTTTCGGGAATAATTCTTCTATCAAACGAGAATCTATTCCATAAAA
ATGAATAGGGGGCTTTTTTC

Downstream 100 bases:

>100_bases
ACTTAAAGTCGAAGGATCACTTTGATCCTTCGACTTTTTTGTACAAAATAAAACTCCCAATTGGCGAAAACTTCCTGTAT
ACTATTGCTATATGTAAAAA

Product: YwnB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV
TSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFE
PGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNERFTVAGK

Sequences:

>Translated_213_residues
MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV
TSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFE
PGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNERFTVAGK
>Mature_213_residues
MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV
TSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFE
PGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNERFTVAGK

Specific function: Unknown

COG id: COG2910

COG function: function code R; Putative NADH-flavin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 23342; Mature: 23342

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLS
CEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESK
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCEEHHCC
GLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSD
CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCCEEECCCEEEECCC
GNSFISMEDYAIAVLDEIERPNHLNERFTVAGK
CCCEEEECCCEEHHHHHHCCCCCCCCEEEECCC
>Mature Secondary Structure
MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLS
CEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESK
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCEEHHCC
GLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSD
CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCCEEECCCEEEECCC
GNSFISMEDYAIAVLDEIERPNHLNERFTVAGK
CCCEEEECCCEEHHHHHHCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]