Click here to switch to the map view.

The map label for this gene is 226223363

Identifier: 226223363

GI number: 226223363

Start: 772213

End: 772722

Strand: Direct

Name: 226223363

Synonym: Lm4b_00760

Alternate gene names: NA

Gene position: 772213-772722 (Clockwise)

Preceding gene: 226223362

Following gene: 226223365

Centisome position: 26.51

GC content: 37.25

Gene sequence:

>510_bases
ATGTTAAACGAAAATATTAAAGCAATCAGGAAATCAAAAGGACTTTCGCAAGAAGAAATTGCCATCAAACTGAATGTGGT
GCGACAAACAATCTCTAAATGGGAGCAAGGATTGTCAGTTCCTGATTCTGATATGTTAATCTCCATATCGGAAGTGCTTG
AAACACCAGTAAGCACTTTGCTTGGAGAAACTGTTATGGTTTCAAAGGTTGATGACGTAAAAGCGATCTCCGAAAAACTG
GAGATTATAAACTTACAGCTTGCACAAAGAAAGACCGCCAGACAAAAAATGCTTTATTGGCTATTTATCTCGATGTGTAC
CGTTATAGCAATAATTTCAGCGGTCTTTATAATACTAAATAGTCCTTACTTAGGTTGGGATTATAGTGACCCTGAAACTA
GCGTTATCGGAGTAGCTTTTCATACATTTGAATGGTTGTTTGTCAGATTAGCACCGATTATCCTTATAGGAGGAGTCGTT
GGAATTTTTTTAACGCGGAAGAACGTATGA

Upstream 100 bases:

>100_bases
TCGTGGCTATAAAGTTTGAATGTTAATATGCGTTGCTTGTAGCAATGGACGAGTTCTCATACAATAGTGATAACAACTGG
AAGAAAGGTGGGTATCTCTA

Downstream 100 bases:

>100_bases
AATCGTACTATTTTTGATGCTTTTGGGGATGAGTCAGGCTTCAAAATTACTGTTTGTAAAAAGGAACGGAATCAAAGCAC
CAAACCCATATTGTCAAACA

Product: transcription regulator

Products: NA

Alternate protein names: Phage Repressor; Transcription Regulator

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSDMLISISEVLETPVSTLLGETVMVSKVDDVKAISEKL
EIINLQLAQRKTARQKMLYWLFISMCTVIAIISAVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVV
GIFLTRKNV

Sequences:

>Translated_169_residues
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSDMLISISEVLETPVSTLLGETVMVSKVDDVKAISEKL
EIINLQLAQRKTARQKMLYWLFISMCTVIAIISAVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVV
GIFLTRKNV
>Mature_169_residues
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSDMLISISEVLETPVSTLLGETVMVSKVDDVKAISEKL
EIINLQLAQRKTARQKMLYWLFISMCTVIAIISAVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVV
GIFLTRKNV

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18953; Mature: 18953

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSDMLISISEVLETPVSTL
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHHHHHHHH
LGETVMVSKVDDVKAISEKLEIINLQLAQRKTARQKMLYWLFISMCTVIAIISAVFIILN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVVGIFLTRKNV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSDMLISISEVLETPVSTL
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHHHHHHHH
LGETVMVSKVDDVKAISEKLEIINLQLAQRKTARQKMLYWLFISMCTVIAIISAVFIILN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVVGIFLTRKNV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA