| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223289
Identifier: 226223289
GI number: 226223289
Start: 706802
End: 707470
Strand: Direct
Name: 226223289
Synonym: Lm4b_00686
Alternate gene names: NA
Gene position: 706802-707470 (Clockwise)
Preceding gene: 226223288
Following gene: 226223290
Centisome position: 24.27
GC content: 33.18
Gene sequence:
>669_bases ATGGTGGTGAAACAAATGGACGACTGGTCAACTTTGATAGGCGAGCTAGAACATAATACCCCAGAAAAAGTTTGGATTGT TAGAGAAGAACTAAACATATCGGAAGTATTTGAAATACAAAAATTAGAGGCGCATTTTATTTTAGTTTTAGAAGGTGTCT TGCGTATGGAAAATGAACATCAACAAATTCTGCATTATTTTAGGGAGAATAACGTCATATATCAATCTCCATATGAATTA AGAGTACAAAATAAACTAAGACTAGTTGCTGAAACACCTGCTCACATTGTTTTACTGCACCGTGAGTTTTTCCTTAATTA TGCAACAAACCAACCTGCTTATTCTGAAAAATTAGTGCGAGCAATTATGGATAATGCCGCGAGTTTTATGTTTGAGTTAA TGAAGAATGACCTTAAATCAGAGGACCGATTGGCTTATTCATTACAGCAGCTATGCCAAAGTTTAGAATTAGAAGTAAAA AATGAGTTTTATCTACTGCCTCATTATATTAATAAGAATAAATTGGCGCTTTATAGTGATATTTCGAGGAAAAGTTTATA CAAATACCTTCAAAATTTAGAAAGAAAAGGACAAATCAAAATGAATGGTAATCAAATACTTGTCCGCATTTCGCGATTCA CAAATAGCGAGAATGTAGATTGGTTGTAG
Upstream 100 bases:
>100_bases GAATCATTCGCATTCTAGGGCTTATTTTTAGAAACGATTTTTTCATGGATAAAAGGGTATAGTAACAAAATAGGAACGCG GTTAGGAAAACATAAACTTG
Downstream 100 bases:
>100_bases AACAAAAAAGCCGCAATTACTGGCAAAATTAATAATTCGAAAAAACGACACATGATTGATAGTATGGAGTGGATTTTACA CATATTTGTCCTCTTCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MVVKQMDDWSTLIGELEHNTPEKVWIVREELNISEVFEIQKLEAHFILVLEGVLRMENEHQQILHYFRENNVIYQSPYEL RVQNKLRLVAETPAHIVLLHREFFLNYATNQPAYSEKLVRAIMDNAASFMFELMKNDLKSEDRLAYSLQQLCQSLELEVK NEFYLLPHYINKNKLALYSDISRKSLYKYLQNLERKGQIKMNGNQILVRISRFTNSENVDWL
Sequences:
>Translated_222_residues MVVKQMDDWSTLIGELEHNTPEKVWIVREELNISEVFEIQKLEAHFILVLEGVLRMENEHQQILHYFRENNVIYQSPYEL RVQNKLRLVAETPAHIVLLHREFFLNYATNQPAYSEKLVRAIMDNAASFMFELMKNDLKSEDRLAYSLQQLCQSLELEVK NEFYLLPHYINKNKLALYSDISRKSLYKYLQNLERKGQIKMNGNQILVRISRFTNSENVDWL >Mature_222_residues MVVKQMDDWSTLIGELEHNTPEKVWIVREELNISEVFEIQKLEAHFILVLEGVLRMENEHQQILHYFRENNVIYQSPYEL RVQNKLRLVAETPAHIVLLHREFFLNYATNQPAYSEKLVRAIMDNAASFMFELMKNDLKSEDRLAYSLQQLCQSLELEVK NEFYLLPHYINKNKLALYSDISRKSLYKYLQNLERKGQIKMNGNQILVRISRFTNSENVDWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26483; Mature: 26483
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVKQMDDWSTLIGELEHNTPEKVWIVREELNISEVFEIQKLEAHFILVLEGVLRMENEH CCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH QQILHYFRENNVIYQSPYELRVQNKLRLVAETPAHIVLLHREFFLNYATNQPAYSEKLVR HHHHHHHHHCCEEEECCCEEEECCCEEEEECCCCEEEEEEHHHHHHHCCCCCHHHHHHHH AIMDNAASFMFELMKNDLKSEDRLAYSLQQLCQSLELEVKNEFYLLPHYINKNKLALYSD HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCEEEECEEECCCCEEEHHH ISRKSLYKYLQNLERKGQIKMNGNQILVRISRFTNSENVDWL HHHHHHHHHHHHHHHCCCEEECCCEEEEEEEECCCCCCCCCC >Mature Secondary Structure MVVKQMDDWSTLIGELEHNTPEKVWIVREELNISEVFEIQKLEAHFILVLEGVLRMENEH CCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH QQILHYFRENNVIYQSPYELRVQNKLRLVAETPAHIVLLHREFFLNYATNQPAYSEKLVR HHHHHHHHHCCEEEECCCEEEECCCEEEEECCCCEEEEEEHHHHHHHCCCCCHHHHHHHH AIMDNAASFMFELMKNDLKSEDRLAYSLQQLCQSLELEVKNEFYLLPHYINKNKLALYSD HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCEEEECEEECCCCEEEHHH ISRKSLYKYLQNLERKGQIKMNGNQILVRISRFTNSENVDWL HHHHHHHHHHHHHHHCCCEEECCCEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA