Click here to switch to the map view.

The map label for this gene is inlI [H]

Identifier: 226223288

GI number: 226223288

Start: 704144

End: 706618

Strand: Direct

Name: inlI [H]

Synonym: Lm4b_00685

Alternate gene names: 226223288

Gene position: 704144-706618 (Clockwise)

Preceding gene: 226223287

Following gene: 226223289

Centisome position: 24.18

GC content: 36.97

Gene sequence:

>2475_bases
TTGAAGAAGATTTTACATATTGTTATCGCACTTAGTGTAATTTGTTCGATAATTTTAGTGCCAGTAGATTGGTCCGCAAA
AGCAGGCGGTAATAATAAGCGAGATGATCTTATTAAATCTGTCAGTTTTTATAATTCAAATGGACAAAATGTAACGGCGA
AGGAAAACTATAATGAAAAACTAAATTATTTTTTAGAAGTAGCTTTTGGAGGGAATTCTTTCCAAAAAGGGGACTATTTT
AATATTACTTTATCATCTGATGCCTTACTCTATACAGAGAAAGCCTATGATTTGAAAGTGGATATTGACCCAACAGCGGT
AACTAATGAACAAGTAGTTGGTAAAGTTACTGTAGAAAAAATTAATGGATCACCAACATTGCACTTTGTTTTTACAGAAG
ATTCAGAGTCTTTTTTTATAAACAGCTTTGATGCGAGTTTTAAAATACAGGTGATGCCAGCGCATGGCGATAAAAACGTT
ATTAATCTTTCCTATAGTGGCGCTGCAAAAAACTTTAAAAACATTGGGACGAGCAGTGTGGAATGGAACGTAAATATGGC
AGATGACTGGCCGCCAGTTGGAATTAGCGATTTTTCTAAAATAAGTGGCGATTTATACCATGCGATTTTAGTGTATGAAA
AGCCGAGTAGTAAAGTGAATTACGAAACAGAAATTTTGGTATCGTATCCGCTTTTTGAAAAACGAATTCCACTTGGAAAT
GTGCAAAATATTAAAATTGAAGTTTGGGATGAAGCGAAGGAGATTTATAGAGTTGGTGTAGCCGGGGTGGATTACGGAAC
GATTACATACGATGTTGGAACTCCATTTGTAGGCGGTCCTATTTTCCAAATGAATTGTACTATTCCGTTCAAAGGGATTT
CTACTAAAACTCGTGTTAGTTTTGATATTGATACGAATGTGGACGGGAAACCTGGAACAACAGATCCGTACTTAGTTAGT
CTTTCTTCCGTATCATCAGCTACAAAGTCGCTGGAATTCTATCCAGTGAATAACGCTGATACGAAAATGACAGCTGCTTT
TTTTGGGAAAGTAACGACGCGCTTTGAGGATGAGTTAGGCAATCCAGTTACTTTTGATAATTATAGTACTGTAACAACAC
CAGGGAAAGTCAATCAAGATGGTAAATTTGAAATAGCGGAACCTTTTTTACACAATTCCGTCCAAAACGTGGATAAACAC
GCCTATGATACCCTTTTGGATACTAATAAATATAAATTATTAGAGGTAACTTCTCCTAATAAACTATCTGAAACAGCGGA
TAATTTAAGTATTCAAATAAAGCGTGGTTATCAGAATGATGTTTTATACAAAATAAAAGCTCTCCAAAAACCTGTCATTA
GCGCGCTTCCTGAAATCGAATATAGTAAAACAGTGAATAGGACCATGGAAGAGTTTTTGGAAGATGTGGAAGCAAAAACA
GATATTCCAGCTGATATAGACTGTGATTTAACGAATGTGAAATGGGGTGTTCCGGGGGATTACCTAGTTCTTATAACCGC
GGTGAATGAGGATAATCAAGCAGCGGATCCTGTTCCTGTAACGATTAAAATTTCCAAAAATCCCGCACCAGTCATAACGG
TAGACCCGGAAATAATCTACGATAAAACAGTGACGAAAGAGGAGAGCACATTACTAAATGAAGTAAATGCGCGAACAAAT
GACGGTTCGACGATAACTTCTAACATTAACGACAAAGTAAAATGGGGCGTGCCAGGCGATTACGAGGTTACTTTGAACGC
GGTAAATGAAGACGGCGTGGCAGCGGAATCGAAAACATTTATCGTCCGCATTTTAAAAAGCCCAGCACCAATAATCACGG
TAGATCCTGAAATAACCTATCCGAAAACAATAACTAAAACGGAAGCTGAACTCCTTCAAGAAGTAAATGCGCAAACAAAT
GATGGTTCACCGCTTGTTTCTGATATGAATGACAAAGTAAAATGGGGCGTGCCAGGCGATTATGAAGTTACGTTAAACGC
GATAAATGAAGACGGCGTAGCAGCGGAAGCGAAAACATTTATCGTCCGCATTTTAAAAAGTCCAGCACCAATAATCACGG
TAGATCCTGAAATAACGTATGATTCTTCTGTAATAAAAGACGAAAGAGAGCTATTAAAAGATGTCCATGCTCGTTCAAGT
GACGGTTCGGTAATAACTTCTGATAGTCAGGTAAAAGTAAAATGGAAAAAAACAGGAAGCTATACCGTTACTTTAAATGC
AGTAAATGAAGATGGCATTTCTGCTAATTCTGTGCAATTCACTGTGCATATAGTAGACGCTAAAGCAATACCAGTAGTAA
TTGAAGAAAAGCCTGAATCCACTCCAAAACCAGATACTAAAGAAAAAGTAGTTATTAAGAAAGAAAAACTACCAAAAACA
GGAGATACGAATACAAAAACTATATTGAGTGGGATTTTTTGTTTAGGCGCTTGGTATTTGCTTAGAAGAAAATAG

Upstream 100 bases:

>100_bases
CTAAGTAGATATAATGGTTTTTAGTTAGGTGCAGAGATACGCAAGAAAACACAGGAGGGCTTGGGACAGGTCAAACCATA
CTACAAAGGAGGAGATGTAA

Downstream 100 bases:

>100_bases
ACAAAAACCGCAAGTGAAGTCACTTGCGGTTTTTTTGCCGATTGTAGCTTAAAACTGCTAGAGTAGATATAAATTGCCAA
TTTGAATCATTCGCATTCTA

Product: peptidoglycan linked protein (LPxTG)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 824; Mature: 824

Protein sequence:

>824_residues
MKKILHIVIALSVICSIILVPVDWSAKAGGNNKRDDLIKSVSFYNSNGQNVTAKENYNEKLNYFLEVAFGGNSFQKGDYF
NITLSSDALLYTEKAYDLKVDIDPTAVTNEQVVGKVTVEKINGSPTLHFVFTEDSESFFINSFDASFKIQVMPAHGDKNV
INLSYSGAAKNFKNIGTSSVEWNVNMADDWPPVGISDFSKISGDLYHAILVYEKPSSKVNYETEILVSYPLFEKRIPLGN
VQNIKIEVWDEAKEIYRVGVAGVDYGTITYDVGTPFVGGPIFQMNCTIPFKGISTKTRVSFDIDTNVDGKPGTTDPYLVS
LSSVSSATKSLEFYPVNNADTKMTAAFFGKVTTRFEDELGNPVTFDNYSTVTTPGKVNQDGKFEIAEPFLHNSVQNVDKH
AYDTLLDTNKYKLLEVTSPNKLSETADNLSIQIKRGYQNDVLYKIKALQKPVISALPEIEYSKTVNRTMEEFLEDVEAKT
DIPADIDCDLTNVKWGVPGDYLVLITAVNEDNQAADPVPVTIKISKNPAPVITVDPEIIYDKTVTKEESTLLNEVNARTN
DGSTITSNINDKVKWGVPGDYEVTLNAVNEDGVAAESKTFIVRILKSPAPIITVDPEITYPKTITKTEAELLQEVNAQTN
DGSPLVSDMNDKVKWGVPGDYEVTLNAINEDGVAAEAKTFIVRILKSPAPIITVDPEITYDSSVIKDERELLKDVHARSS
DGSVITSDSQVKVKWKKTGSYTVTLNAVNEDGISANSVQFTVHIVDAKAIPVVIEEKPESTPKPDTKEKVVIKKEKLPKT
GDTNTKTILSGIFCLGAWYLLRRK

Sequences:

>Translated_824_residues
MKKILHIVIALSVICSIILVPVDWSAKAGGNNKRDDLIKSVSFYNSNGQNVTAKENYNEKLNYFLEVAFGGNSFQKGDYF
NITLSSDALLYTEKAYDLKVDIDPTAVTNEQVVGKVTVEKINGSPTLHFVFTEDSESFFINSFDASFKIQVMPAHGDKNV
INLSYSGAAKNFKNIGTSSVEWNVNMADDWPPVGISDFSKISGDLYHAILVYEKPSSKVNYETEILVSYPLFEKRIPLGN
VQNIKIEVWDEAKEIYRVGVAGVDYGTITYDVGTPFVGGPIFQMNCTIPFKGISTKTRVSFDIDTNVDGKPGTTDPYLVS
LSSVSSATKSLEFYPVNNADTKMTAAFFGKVTTRFEDELGNPVTFDNYSTVTTPGKVNQDGKFEIAEPFLHNSVQNVDKH
AYDTLLDTNKYKLLEVTSPNKLSETADNLSIQIKRGYQNDVLYKIKALQKPVISALPEIEYSKTVNRTMEEFLEDVEAKT
DIPADIDCDLTNVKWGVPGDYLVLITAVNEDNQAADPVPVTIKISKNPAPVITVDPEIIYDKTVTKEESTLLNEVNARTN
DGSTITSNINDKVKWGVPGDYEVTLNAVNEDGVAAESKTFIVRILKSPAPIITVDPEITYPKTITKTEAELLQEVNAQTN
DGSPLVSDMNDKVKWGVPGDYEVTLNAINEDGVAAEAKTFIVRILKSPAPIITVDPEITYDSSVIKDERELLKDVHARSS
DGSVITSDSQVKVKWKKTGSYTVTLNAVNEDGISANSVQFTVHIVDAKAIPVVIEEKPESTPKPDTKEKVVIKKEKLPKT
GDTNTKTILSGIFCLGAWYLLRRK
>Mature_824_residues
MKKILHIVIALSVICSIILVPVDWSAKAGGNNKRDDLIKSVSFYNSNGQNVTAKENYNEKLNYFLEVAFGGNSFQKGDYF
NITLSSDALLYTEKAYDLKVDIDPTAVTNEQVVGKVTVEKINGSPTLHFVFTEDSESFFINSFDASFKIQVMPAHGDKNV
INLSYSGAAKNFKNIGTSSVEWNVNMADDWPPVGISDFSKISGDLYHAILVYEKPSSKVNYETEILVSYPLFEKRIPLGN
VQNIKIEVWDEAKEIYRVGVAGVDYGTITYDVGTPFVGGPIFQMNCTIPFKGISTKTRVSFDIDTNVDGKPGTTDPYLVS
LSSVSSATKSLEFYPVNNADTKMTAAFFGKVTTRFEDELGNPVTFDNYSTVTTPGKVNQDGKFEIAEPFLHNSVQNVDKH
AYDTLLDTNKYKLLEVTSPNKLSETADNLSIQIKRGYQNDVLYKIKALQKPVISALPEIEYSKTVNRTMEEFLEDVEAKT
DIPADIDCDLTNVKWGVPGDYLVLITAVNEDNQAADPVPVTIKISKNPAPVITVDPEIIYDKTVTKEESTLLNEVNARTN
DGSTITSNINDKVKWGVPGDYEVTLNAVNEDGVAAESKTFIVRILKSPAPIITVDPEITYPKTITKTEAELLQEVNAQTN
DGSPLVSDMNDKVKWGVPGDYEVTLNAINEDGVAAEAKTFIVRILKSPAPIITVDPEITYDSSVIKDERELLKDVHARSS
DGSVITSDSQVKVKWKKTGSYTVTLNAVNEDGISANSVQFTVHIVDAKAIPVVIEEKPESTPKPDTKEKVVIKKEKLPKT
GDTNTKTILSGIFCLGAWYLLRRK

Specific function: Unknown. A role in virulence could not be demonstrated [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 MucBP domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014755
- InterPro:   IPR014756
- InterPro:   IPR001611
- InterPro:   IPR019931
- InterPro:   IPR012569
- InterPro:   IPR000601
- InterPro:   IPR001899 [H]

Pfam domain/function: PF00560 LRR_1; PF08191 LRR_adjacent [H]

EC number: NA

Molecular weight: Translated: 90874; Mature: 90874

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILHIVIALSVICSIILVPVDWSAKAGGNNKRDDLIKSVSFYNSNGQNVTAKENYNEK
CHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHEECCCCCEEEECCCCCCC
LNYFLEVAFGGNSFQKGDYFNITLSSDALLYTEKAYDLKVDIDPTAVTNEQVVGKVTVEK
EEEEEEEEECCCCCCCCCEEEEEECCCEEEEEECCEEEEEECCCCCCCCCCEEEEEEEEE
INGSPTLHFVFTEDSESFFINSFDASFKIQVMPAHGDKNVINLSYSGAAKNFKNIGTSSV
ECCCCEEEEEEECCCCEEEEEEECCEEEEEEEECCCCCCEEEEEECCCCCHHHHCCCCEE
EWNVNMADDWPPVGISDFSKISGDLYHAILVYEKPSSKVNYETEILVSYPLFEKRIPLGN
EEEEEECCCCCCCCCCHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEECCCHHHCCCCCC
VQNIKIEVWDEAKEIYRVGVAGVDYGTITYDVGTPFVGGPIFQMNCTIPFKGISTKTRVS
CCEEEEEEECCHHHHHEECCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCEEEE
FDIDTNVDGKPGTTDPYLVSLSSVSSATKSLEFYPVNNADTKMTAAFFGKVTTRFEDELG
EEECCCCCCCCCCCCCEEEEEHHHHHHHHCEEEEECCCCCCEEEHHHHHHHHHHHHHHCC
NPVTFDNYSTVTTPGKVNQDGKFEIAEPFLHNSVQNVDKHAYDTLLDTNKYKLLEVTSPN
CCEEECCCCEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
KLSETADNLSIQIKRGYQNDVLYKIKALQKPVISALPEIEYSKTVNRTMEEFLEDVEAKT
CHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
DIPADIDCDLTNVKWGVPGDYLVLITAVNEDNQAADPVPVTIKISKNPAPVITVDPEIIY
CCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEECCCEEE
DKTVTKEESTLLNEVNARTNDGSTITSNINDKVKWGVPGDYEVTLNAVNEDGVAAESKTF
CCCCCCHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCCCEEEEEEEECCCCCCCCCCEE
IVRILKSPAPIITVDPEITYPKTITKTEAELLQEVNAQTNDGSPLVSDMNDKVKWGVPGD
EEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
YEVTLNAINEDGVAAEAKTFIVRILKSPAPIITVDPEITYDSSVIKDERELLKDVHARSS
EEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCC
DGSVITSDSQVKVKWKKTGSYTVTLNAVNEDGISANSVQFTVHIVDAKAIPVVIEEKPES
CCCEEECCCEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEEECCEEEEEEECCCCC
TPKPDTKEKVVIKKEKLPKTGDTNTKTILSGIFCLGAWYLLRRK
CCCCCCCCEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKILHIVIALSVICSIILVPVDWSAKAGGNNKRDDLIKSVSFYNSNGQNVTAKENYNEK
CHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHEECCCCCEEEECCCCCCC
LNYFLEVAFGGNSFQKGDYFNITLSSDALLYTEKAYDLKVDIDPTAVTNEQVVGKVTVEK
EEEEEEEEECCCCCCCCCEEEEEECCCEEEEEECCEEEEEECCCCCCCCCCEEEEEEEEE
INGSPTLHFVFTEDSESFFINSFDASFKIQVMPAHGDKNVINLSYSGAAKNFKNIGTSSV
ECCCCEEEEEEECCCCEEEEEEECCEEEEEEEECCCCCCEEEEEECCCCCHHHHCCCCEE
EWNVNMADDWPPVGISDFSKISGDLYHAILVYEKPSSKVNYETEILVSYPLFEKRIPLGN
EEEEEECCCCCCCCCCHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEECCCHHHCCCCCC
VQNIKIEVWDEAKEIYRVGVAGVDYGTITYDVGTPFVGGPIFQMNCTIPFKGISTKTRVS
CCEEEEEEECCHHHHHEECCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCEEEE
FDIDTNVDGKPGTTDPYLVSLSSVSSATKSLEFYPVNNADTKMTAAFFGKVTTRFEDELG
EEECCCCCCCCCCCCCEEEEEHHHHHHHHCEEEEECCCCCCEEEHHHHHHHHHHHHHHCC
NPVTFDNYSTVTTPGKVNQDGKFEIAEPFLHNSVQNVDKHAYDTLLDTNKYKLLEVTSPN
CCEEECCCCEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
KLSETADNLSIQIKRGYQNDVLYKIKALQKPVISALPEIEYSKTVNRTMEEFLEDVEAKT
CHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
DIPADIDCDLTNVKWGVPGDYLVLITAVNEDNQAADPVPVTIKISKNPAPVITVDPEIIY
CCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEECCCEEE
DKTVTKEESTLLNEVNARTNDGSTITSNINDKVKWGVPGDYEVTLNAVNEDGVAAESKTF
CCCCCCHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCCCEEEEEEEECCCCCCCCCCEE
IVRILKSPAPIITVDPEITYPKTITKTEAELLQEVNAQTNDGSPLVSDMNDKVKWGVPGD
EEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
YEVTLNAINEDGVAAEAKTFIVRILKSPAPIITVDPEITYDSSVIKDERELLKDVHARSS
EEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCC
DGSVITSDSQVKVKWKKTGSYTVTLNAVNEDGISANSVQFTVHIVDAKAIPVVIEEKPES
CCCEEECCCEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEEECCEEEEEEECCCCC
TPKPDTKEKVVIKKEKLPKTGDTNTKTILSGIFCLGAWYLLRRK
CCCCCCCCEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]