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The map label for this gene is 226223285

Identifier: 226223285

GI number: 226223285

Start: 701829

End: 702458

Strand: Direct

Name: 226223285

Synonym: Lm4b_00682

Alternate gene names: NA

Gene position: 701829-702458 (Clockwise)

Preceding gene: 226223284

Following gene: 226223287

Centisome position: 24.1

GC content: 36.98

Gene sequence:

>630_bases
GTGAATGTAAACGAACAAAAAGTGTTAGTTTTAAATAATTTAGTGGAGCATTATGGTTATCAAGATTGGTGGGAAGCCGA
TAATCGTCTGGCTGATTGGCTTTCGATGATATTAATCCAGCGTACGACAGAGAAAAATGCCAAACAAGCATTAGCGAACC
TTGCACCATATTTAGATTTAGATAGCTTAATTGAAATGGATAAAGCGAAATTGGAAGAATTAATCTATCCAGCGGGTTTT
TATAAACAAAAAAGTATCTATATTAAAGCACTTGCTGAGTGGTTCTATGGTCACGGAGCTAGTTTAGATAAGTTTCAGAC
GTATTCAACGGAAGCTTTACGAAAAGAGTTGGTAGGCATAAAGGGTGTCGGGGAAGAAACGGCGGATGCAATGTTGCTGT
ATATTTTTGAGCGGAATGTGTTTATTGCTGACTTATATGCCAGACGACTATTTACTAGGTTGGGTTTTGGTGAATATACA
ACTTATGCACAAATGCGCGATGAATTTATGCCAATAATAGAGAATATTCCACATAAACTATGTAAAGAATGGCACTCAGT
CATTGATGTGCACGGAAAACATTTTGGGAAAGACAAAAGTATGAATGAATCTTGGCTGCTAGAAAGCTAG

Upstream 100 bases:

>100_bases
CATGTTACTTTCTCTTTTAATATTTACTAAGAATAAGTCTCAAAAGAATTTACGCTGAAGTGACACAAAAGAATAACAGA
TTGGAACGAGGTGATGCAAG

Downstream 100 bases:

>100_bases
CTCTTAACAATATCTATACCTTTTATCCTGATAAACTGATCCAACAAAATTTCATATAAATAAGCAATCTCTTCAAAACG
GAGGTCATTCATAATTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MNVNEQKVLVLNNLVEHYGYQDWWEADNRLADWLSMILIQRTTEKNAKQALANLAPYLDLDSLIEMDKAKLEELIYPAGF
YKQKSIYIKALAEWFYGHGASLDKFQTYSTEALRKELVGIKGVGEETADAMLLYIFERNVFIADLYARRLFTRLGFGEYT
TYAQMRDEFMPIIENIPHKLCKEWHSVIDVHGKHFGKDKSMNESWLLES

Sequences:

>Translated_209_residues
MNVNEQKVLVLNNLVEHYGYQDWWEADNRLADWLSMILIQRTTEKNAKQALANLAPYLDLDSLIEMDKAKLEELIYPAGF
YKQKSIYIKALAEWFYGHGASLDKFQTYSTEALRKELVGIKGVGEETADAMLLYIFERNVFIADLYARRLFTRLGFGEYT
TYAQMRDEFMPIIENIPHKLCKEWHSVIDVHGKHFGKDKSMNESWLLES
>Mature_209_residues
MNVNEQKVLVLNNLVEHYGYQDWWEADNRLADWLSMILIQRTTEKNAKQALANLAPYLDLDSLIEMDKAKLEELIYPAGF
YKQKSIYIKALAEWFYGHGASLDKFQTYSTEALRKELVGIKGVGEETADAMLLYIFERNVFIADLYARRLFTRLGFGEYT
TYAQMRDEFMPIIENIPHKLCKEWHSVIDVHGKHFGKDKSMNESWLLES

Specific function: Unknown

COG id: COG2231

COG function: function code L; Uncharacterized protein related to Endonuclease III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Nth/MutY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003651
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: 4.2.99.18

Molecular weight: Translated: 24444; Mature: 24444

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVNEQKVLVLNNLVEHYGYQDWWEADNRLADWLSMILIQRTTEKNAKQALANLAPYLDL
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DSLIEMDKAKLEELIYPAGFYKQKSIYIKALAEWFYGHGASLDKFQTYSTEALRKELVGI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
KGVGEETADAMLLYIFERNVFIADLYARRLFTRLGFGEYTTYAQMRDEFMPIIENIPHKL
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CKEWHSVIDVHGKHFGKDKSMNESWLLES
HHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNVNEQKVLVLNNLVEHYGYQDWWEADNRLADWLSMILIQRTTEKNAKQALANLAPYLDL
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DSLIEMDKAKLEELIYPAGFYKQKSIYIKALAEWFYGHGASLDKFQTYSTEALRKELVGI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
KGVGEETADAMLLYIFERNVFIADLYARRLFTRLGFGEYTTYAQMRDEFMPIIENIPHKL
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CKEWHSVIDVHGKHFGKDKSMNESWLLES
HHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]