Click here to switch to the map view.

The map label for this gene is 226223287

Identifier: 226223287

GI number: 226223287

Start: 703585

End: 703866

Strand: Direct

Name: 226223287

Synonym: Lm4b_00684

Alternate gene names: NA

Gene position: 703585-703866 (Clockwise)

Preceding gene: 226223285

Following gene: 226223288

Centisome position: 24.16

GC content: 31.56

Gene sequence:

>282_bases
ATGGCTAAAGCAAAATATGACGAGAATTTCAAAAAAAGTTTGGTTGCTTTATATCGCAGAGGGAAAACGAAGCATAGTAT
CTGTCAGGAATTTAGTGTCCCTAATTCAACTTTTGGAAAATGGATAAAAAAATTTAATAATGATGACAATATTGAATCGA
ACGAAATCTTAAATATCTTGCAAGCGCAGGAACTAAAAAAACAACGGGCGCTATTAGAAGAAGAATTATCTATCTTAACA
GAAGCAATTAATGTCTTTGAAAACCCGCCAATTAAAAATTGA

Upstream 100 bases:

>100_bases
TATGAAAAAATGTTAGGAAAACTTGATATATTAGAAATGAAATAACAGATATATTTGCATCTTTTTTTATGATATTTAAC
AATAGAAAGAAGGAAGTTTT

Downstream 100 bases:

>100_bases
ATACTATGTTCAAAGTGAAATTATTTATATCATAGTAAAGAAAACAACCGTTCTCTATCTAAAATTAAGAGAACGGTTGT
TTTTTTTAGTAAGAAATATT

Product: transposase

Products: NA

Alternate protein names: Transposase Subfamily; Truncated Transposase

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MAKAKYDENFKKSLVALYRRGKTKHSICQEFSVPNSTFGKWIKKFNNDDNIESNEILNILQAQELKKQRALLEEELSILT
EAINVFENPPIKN

Sequences:

>Translated_93_residues
MAKAKYDENFKKSLVALYRRGKTKHSICQEFSVPNSTFGKWIKKFNNDDNIESNEILNILQAQELKKQRALLEEELSILT
EAINVFENPPIKN
>Mature_92_residues
AKAKYDENFKKSLVALYRRGKTKHSICQEFSVPNSTFGKWIKKFNNDDNIESNEILNILQAQELKKQRALLEEELSILTE
AINVFENPPIKN

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10813; Mature: 10682

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAKYDENFKKSLVALYRRGKTKHSICQEFSVPNSTFGKWIKKFNNDDNIESNEILNIL
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
QAQELKKQRALLEEELSILTEAINVFENPPIKN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKAKYDENFKKSLVALYRRGKTKHSICQEFSVPNSTFGKWIKKFNNDDNIESNEILNIL
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
QAQELKKQRALLEEELSILTEAINVFENPPIKN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA