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The map label for this gene is 226223258

Identifier: 226223258

GI number: 226223258

Start: 673078

End: 673605

Strand: Direct

Name: 226223258

Synonym: Lm4b_00655

Alternate gene names: NA

Gene position: 673078-673605 (Clockwise)

Preceding gene: 226223257

Following gene: 226223259

Centisome position: 23.11

GC content: 34.85

Gene sequence:

>528_bases
ATGATATTATTAGTTGTTGATACACAAAAATTAATTATGACGAATAATCTATACAATTTCGATTCACTTGTACCCAATAT
AGAACAATTAATCGTCACTGCTCGAAAAAATAAAATAGAAATAGTTTATATACGACATGACGACGGACCTAATACAGAAC
TTACAGAAGGAAAAGAAGGCTTCGAAATTTACGAAAAATTCCAACCAACCACACTCGAAAGAATTTTTGATAAAAGCGTT
AATAGCGCTTTTAAAGGAACAGGCTTACTTGCTTATCTCAAAGAAAAAGGAACGAAGAAAATTGTAGTAGCAGGATTGCA
AACCGATTTTTGCATTGACGCCACAGTGAAATGTGGTTTTGAACATGGCTTTCACATGATCGTTCCCGCCCATGCCAATT
CGACGGAAGATAACCACTTTATGTCAGGGGAGAATAGTTACAAGTACTATAATGAATGGATGTGGCCTGATCGTTACGCG
ACCTGCATATCTATAGAAGAAACAATTAATGAAATGGAAAATAACTAA

Upstream 100 bases:

>100_bases
GGAGAAAGACGAAATGATTGGCGGCTGGAAGGCATACGTGGCACCTACAGCTGGCTAAGCTATGATATAATATAAACAGC
ACTTACGGAGGTCTGAACGA

Downstream 100 bases:

>100_bases
GAGAGTCTAAGCATTACGCTTAGGCTCTTCCTACTTTTTTGATTTAATGGTAGAGTAAAAGGAGTGAATTTTGCAGGAGG
AAATGATGATTAATTTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MILLVVDTQKLIMTNNLYNFDSLVPNIEQLIVTARKNKIEIVYIRHDDGPNTELTEGKEGFEIYEKFQPTTLERIFDKSV
NSAFKGTGLLAYLKEKGTKKIVVAGLQTDFCIDATVKCGFEHGFHMIVPAHANSTEDNHFMSGENSYKYYNEWMWPDRYA
TCISIEETINEMENN

Sequences:

>Translated_175_residues
MILLVVDTQKLIMTNNLYNFDSLVPNIEQLIVTARKNKIEIVYIRHDDGPNTELTEGKEGFEIYEKFQPTTLERIFDKSV
NSAFKGTGLLAYLKEKGTKKIVVAGLQTDFCIDATVKCGFEHGFHMIVPAHANSTEDNHFMSGENSYKYYNEWMWPDRYA
TCISIEETINEMENN
>Mature_175_residues
MILLVVDTQKLIMTNNLYNFDSLVPNIEQLIVTARKNKIEIVYIRHDDGPNTELTEGKEGFEIYEKFQPTTLERIFDKSV
NSAFKGTGLLAYLKEKGTKKIVVAGLQTDFCIDATVKCGFEHGFHMIVPAHANSTEDNHFMSGENSYKYYNEWMWPDRYA
TCISIEETINEMENN

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20131; Mature: 20131

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLVVDTQKLIMTNNLYNFDSLVPNIEQLIVTARKNKIEIVYIRHDDGPNTELTEGKEG
CEEEEEECCEEEEECCCCCHHHHCCCHHHHHEEECCCEEEEEEEEECCCCCCCCCCCCCH
FEIYEKFQPTTLERIFDKSVNSAFKGTGLLAYLKEKGTKKIVVAGLQTDFCIDATVKCGF
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCEEEEEEEEECC
EHGFHMIVPAHANSTEDNHFMSGENSYKYYNEWMWPDRYATCISIEETINEMENN
CCCEEEEEECCCCCCCCCCEECCCCCCEEHHCCCCCCHHEEEEEHHHHHHHHCCC
>Mature Secondary Structure
MILLVVDTQKLIMTNNLYNFDSLVPNIEQLIVTARKNKIEIVYIRHDDGPNTELTEGKEG
CEEEEEECCEEEEECCCCCHHHHCCCHHHHHEEECCCEEEEEEEEECCCCCCCCCCCCCH
FEIYEKFQPTTLERIFDKSVNSAFKGTGLLAYLKEKGTKKIVVAGLQTDFCIDATVKCGF
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCEEEEEEEEECC
EHGFHMIVPAHANSTEDNHFMSGENSYKYYNEWMWPDRYATCISIEETINEMENN
CCCEEEEEECCCCCCCCCCEECCCCCCEEHHCCCCCCHHEEEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA