| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yjjG [C]
Identifier: 226223259
GI number: 226223259
Start: 673691
End: 674395
Strand: Direct
Name: yjjG [C]
Synonym: Lm4b_00656
Alternate gene names: 226223259
Gene position: 673691-674395 (Clockwise)
Preceding gene: 226223258
Following gene: 226223260
Centisome position: 23.13
GC content: 34.89
Gene sequence:
>705_bases ATGATTAATTTAATTTTTGATATTGATGACACAGTTTATGACCAATTAAAACCATTTGAAAACGCATTTAAAACTGTTTT TGGAAAAGCGGACCACCTGAAAATCGAAAATTTATATATTAAAAGTCGATTTTATAGTGATGAAGTGTATCACCGCGTTG TCCAAGGCGAAATGCCGAAAGCAAAAATGCACGTTTACCGGATTACGCAGGCGCTAAATGATTTTGATTATCAAATTACT AAAAAAGAAGCAGAAGCCTTTCAACACGCCTACGAACAAAACCAACGCAAAATCGAACTTACGTCAGGGATTAAAGAAAT TCTCACATGGGCGAAAAAGAACGAAATCACGATGGGAATCATTACAAACGGACCAAAAGAACATCAACAACATAAAATAA ATGATTTACAAATCAATGATTGGATTCCAACCGAGCACACGTTCATTTCTGGTAAAGTCGGTATCGAAAAACCAGACAAG AAAATATTTAAGCTAGTAGAAGAACAAATCGGTATTAAGGGTGCCGAAACCTATTATATTGGCGATTCTTTCGAAAATGA TGTTATCGGTTCAAAAAGTGCTGGTTGGAAATCAATTTGGTTGAATAGACGAGGACATTTGATACCAACAGAGGCAGCAT TTCAGCCAGATTATTGTGTTGAAAATGAGCAACAATTATTCGCAATTTTACAGGAGATATTTTAA
Upstream 100 bases:
>100_bases ATGGAAAATAACTAAGAGAGTCTAAGCATTACGCTTAGGCTCTTCCTACTTTTTTGATTTAATGGTAGAGTAAAAGGAGT GAATTTTGCAGGAGGAAATG
Downstream 100 bases:
>100_bases GACCTTTTTCCATTTTTGGAAAAGGTTTTTTAGTTATGAATTGACACTTCTGATTATAAGAGATATTATAGAGTGGTTAA GTCTTTAATTAAGAAGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MINLIFDIDDTVYDQLKPFENAFKTVFGKADHLKIENLYIKSRFYSDEVYHRVVQGEMPKAKMHVYRITQALNDFDYQIT KKEAEAFQHAYEQNQRKIELTSGIKEILTWAKKNEITMGIITNGPKEHQQHKINDLQINDWIPTEHTFISGKVGIEKPDK KIFKLVEEQIGIKGAETYYIGDSFENDVIGSKSAGWKSIWLNRRGHLIPTEAAFQPDYCVENEQQLFAILQEIF
Sequences:
>Translated_234_residues MINLIFDIDDTVYDQLKPFENAFKTVFGKADHLKIENLYIKSRFYSDEVYHRVVQGEMPKAKMHVYRITQALNDFDYQIT KKEAEAFQHAYEQNQRKIELTSGIKEILTWAKKNEITMGIITNGPKEHQQHKINDLQINDWIPTEHTFISGKVGIEKPDK KIFKLVEEQIGIKGAETYYIGDSFENDVIGSKSAGWKSIWLNRRGHLIPTEAAFQPDYCVENEQQLFAILQEIF >Mature_234_residues MINLIFDIDDTVYDQLKPFENAFKTVFGKADHLKIENLYIKSRFYSDEVYHRVVQGEMPKAKMHVYRITQALNDFDYQIT KKEAEAFQHAYEQNQRKIELTSGIKEILTWAKKNEITMGIITNGPKEHQQHKINDLQINDWIPTEHTFISGKVGIEKPDK KIFKLVEEQIGIKGAETYYIGDSFENDVIGSKSAGWKSIWLNRRGHLIPTEAAFQPDYCVENEQQLFAILQEIF
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI23308749, Length=137, Percent_Identity=28.4671532846715, Blast_Score=68, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR011950 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 27305; Mature: 27305
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLIFDIDDTVYDQLKPFENAFKTVFGKADHLKIENLYIKSRFYSDEVYHRVVQGEMPK CEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHCCCCH AKMHVYRITQALNDFDYQITKKEAEAFQHAYEQNQRKIELTSGIKEILTWAKKNEITMGI HHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCEEEEE ITNGPKEHQQHKINDLQINDWIPTEHTFISGKVGIEKPDKKIFKLVEEQIGIKGAETYYI EECCCHHHHHHCCCCEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEE GDSFENDVIGSKSAGWKSIWLNRRGHLIPTEAAFQPDYCVENEQQLFAILQEIF CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure MINLIFDIDDTVYDQLKPFENAFKTVFGKADHLKIENLYIKSRFYSDEVYHRVVQGEMPK CEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHCCCCH AKMHVYRITQALNDFDYQITKKEAEAFQHAYEQNQRKIELTSGIKEILTWAKKNEITMGI HHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCEEEEE ITNGPKEHQQHKINDLQINDWIPTEHTFISGKVGIEKPDKKIFKLVEEQIGIKGAETYYI EECCCHHHHHHCCCCEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEE GDSFENDVIGSKSAGWKSIWLNRRGHLIPTEAAFQPDYCVENEQQLFAILQEIF CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]