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The map label for this gene is bioY [H]

Identifier: 226223227

GI number: 226223227

Start: 643198

End: 643746

Strand: Reverse

Name: bioY [H]

Synonym: Lm4b_00624

Alternate gene names: 226223227

Gene position: 643746-643198 (Counterclockwise)

Preceding gene: 226223232

Following gene: 226223226

Centisome position: 22.1

GC content: 40.8

Gene sequence:

>549_bases
ATGCGTGATCAGAAATTGAAATTTTTAGTCGTAGATGCTTTATTCGCAGTCATCATTGCTTTACTTGCACAAGTTGCTAT
CCCACTTGGTCCAATTCCACTTACTGGGCAGACGTTTGCCATTGGGTTAGCTGCAACCATTCTTGGAGCTCGTCATGGTA
CCATATCTGTTTTAGTTTACATTGTTCTTGGCGCTGTGGGTATTCCTGTTTTCCAAGGTATGACAGCAGGAATTGGGATT
CTTTTTGGGCCAACTGGCGGATTTATTGTCGGATTTATTTTTAATGCACTACTTACAGGTTGGTTGCTCGAAAAAACAAA
ATTCACTGTTCCTTATGCAATTGTTGCTAATATTTTAGGAGCCATCGTTACGTTAATTTTCGGGGTTTTATGGCTTAAAG
TTAGCACTGGACTTGACTGGCCGACCGCCTTTTTAACAGGCATGGTACCTTTCATTATTCCAGGCATTATCAAAGCGGTT
TTTGCGGCGTTATTAGGGATTCTCATTCGTGATCGTTTGATTAAAGCCAAATTACTTCGAGCATCCTAA

Upstream 100 bases:

>100_bases
TTCATTGCAAGGTACTGGTTAGAAAAAATAGTATTGTTTTTTCAGGAAATAAATGTTAACCTATTTTAGTAAAAAGTTTA
CATTAAGGAGAGATATGTTT

Downstream 100 bases:

>100_bases
GTCCCATTAATACACATTTTGAGTCTTCTCCTATATAATGATAATGATTAACACTGAGAAAAGGGGACTCGGTACATGTC
ATTACTGAATGAGGAAAATA

Product: protein involved in biotin metabolism (BioY)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRDQKLKFLVVDALFAVIIALLAQVAIPLGPIPLTGQTFAIGLAATILGARHGTISVLVYIVLGAVGIPVFQGMTAGIGI
LFGPTGGFIVGFIFNALLTGWLLEKTKFTVPYAIVANILGAIVTLIFGVLWLKVSTGLDWPTAFLTGMVPFIIPGIIKAV
FAALLGILIRDRLIKAKLLRAS

Sequences:

>Translated_182_residues
MRDQKLKFLVVDALFAVIIALLAQVAIPLGPIPLTGQTFAIGLAATILGARHGTISVLVYIVLGAVGIPVFQGMTAGIGI
LFGPTGGFIVGFIFNALLTGWLLEKTKFTVPYAIVANILGAIVTLIFGVLWLKVSTGLDWPTAFLTGMVPFIIPGIIKAV
FAALLGILIRDRLIKAKLLRAS
>Mature_182_residues
MRDQKLKFLVVDALFAVIIALLAQVAIPLGPIPLTGQTFAIGLAATILGARHGTISVLVYIVLGAVGIPVFQGMTAGIGI
LFGPTGGFIVGFIFNALLTGWLLEKTKFTVPYAIVANILGAIVTLIFGVLWLKVSTGLDWPTAFLTGMVPFIIPGIIKAV
FAALLGILIRDRLIKAKLLRAS

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19194; Mature: 19194

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDQKLKFLVVDALFAVIIALLAQVAIPLGPIPLTGQTFAIGLAATILGARHGTISVLVY
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
IVLGAVGIPVFQGMTAGIGILFGPTGGFIVGFIFNALLTGWLLEKTKFTVPYAIVANILG
HHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AIVTLIFGVLWLKVSTGLDWPTAFLTGMVPFIIPGIIKAVFAALLGILIRDRLIKAKLLR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AS
CC
>Mature Secondary Structure
MRDQKLKFLVVDALFAVIIALLAQVAIPLGPIPLTGQTFAIGLAATILGARHGTISVLVY
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
IVLGAVGIPVFQGMTAGIGILFGPTGGFIVGFIFNALLTGWLLEKTKFTVPYAIVANILG
HHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AIVTLIFGVLWLKVSTGLDWPTAFLTGMVPFIIPGIIKAVFAALLGILIRDRLIKAKLLR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]